COG5645


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5645, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein YceK
Function(s) descr. Function unknown (S)

Occurence in the database

COG5645 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1722 FBDBKF_12025 56254 56592 1 yceK Uncharacterized conserved protein YceK Morganella morganii S1
1 group_1722 EHELCC_14280 78113 78451 -1 yceK Uncharacterized conserved protein YceK Morganella morganii S2
2 group_1722 NLDBIP_15375 82050 82388 -1 yceK Uncharacterized conserved protein YceK Morganella morganii S4
3 group_1722 LHKJJB_15235 56254 56592 1 yceK Uncharacterized conserved protein YceK Morganella morganii S3
4 group_1722 HKOGLL_14355 42917 43255 1 yceK Uncharacterized conserved protein YceK Morganella morganii S5
5 group_1722 F4V73_RS14630 159514 159867 -1 YceK/YidQ family lipoprotein Morganella psychrotolerans
6 group_1722 PMI_RS14085 3127299 3127628 -1 YceK/YidQ family lipoprotein Proteus mirabilis HI4320