Orthogroup:group_1741


Homologs in group_1741

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11845 FBDBKF_11845 Morganella morganii S1 crp cAMP-activated global transcriptional regulator CRP
EHELCC_14460 EHELCC_14460 Morganella morganii S2 crp cAMP-activated global transcriptional regulator CRP
NLDBIP_15555 NLDBIP_15555 Morganella morganii S4 crp cAMP-activated global transcriptional regulator CRP
LHKJJB_15055 LHKJJB_15055 Morganella morganii S3 crp cAMP-activated global transcriptional regulator CRP
HKOGLL_14175 HKOGLL_14175 Morganella morganii S5 crp cAMP-activated global transcriptional regulator CRP
F4V73_RS14805 F4V73_RS14805 Morganella psychrotolerans crp cAMP-activated global transcriptional regulator CRP
PMI_RS13930 PMI_RS13930 Proteus mirabilis HI4320 crp cAMP-activated global transcriptional regulator CRP

Distribution of group_1741 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1741 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1741

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1741.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 crp 7

Product

# Product Occurence
1 cAMP-activated global transcriptional regulator CRP 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0664 7 T Signal transduction mechanisms (T) cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10914 7 CRP/FNR family transcriptional regulator, cyclic AMP receptor protein Two-component system
Quorum sensing
Biofilm formation - Pseudomonas aeruginosa
Biofilm formation - Escherichia coli
Biofilm formation - Vibrio cholerae		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00027 7 Cyclic nucleotide-binding domain
PF13545 7 Crp-like helix-turn-helix domain

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG042734 7 cAMP-regulatory protein VF0082 Adherence

Annotations of the 132 SwissProt hits

Annotation Number of occurrences
Anaerobic regulatory protein 4
CRP-like cAMP-activated global transcriptional regulator 3
CRP-like protein Clp 8
Cyclic AMP receptor protein 1
DNA-binding transcriptional dual regulator CRP 1
Electron transport regulator A 1
Fumarate and nitrate reduction regulatory protein 11
Fumarate nitrate reduction regulatory protein 1
Global nitrogen regulator 4
Glutaminase 1 1
HTH-type transcriptional regulator ArcR 14
Lysophospholipase NTE1 4
Lysophospholipase nte1 7
Nitrogen fixation regulation protein FixK 2
Patatin-like phospholipase domain-containing protein ZK370.4 1
Potassium channel AKT1 1
Potassium voltage-gated channel unc-103 1
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 4
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 4
Probable transcriptional regulator flp 1
Pycsar effector protein BcPycTIR 1
Pycsar effector protein PaPycTIR 1
Pycsar effector protein XpPycTIR 1
Regulatory protein HlyX 1
Transcriptional activator protein Anr 1
Transcriptional activator protein FnrA 1
Transcriptional activator protein FnrL 1
Transcriptional activator protein anr 1
Transcriptional activatory protein AadR 1
Transcriptional regulator LdrP 2
Transcriptional regulator SdrP 1
Transcriptional regulatory protein btr 1
Voltage-gated inwardly rectifying potassium channel KCNH2 6
Voltage-gated inwardly rectifying potassium channel KCNH2 (Fragment) 1
Voltage-gated inwardly rectifying potassium channel KCNH6 3
Voltage-gated inwardly rectifying potassium channel KCNH7 3
cAMP-activated global transcriptional regulator CRP 7
cAMP-activated global transcriptional regulator Vfr 1
cAMP-dependent protein kinase regulatory subunit 10
cAMP-dependent protein kinase type I-alpha regulatory subunit 6
cAMP-dependent protein kinase type II regulatory subunit 1
cAMP-dependent protein kinase type II-alpha regulatory subunit 1
cGMP-dependent protein kinase 4
cGMP-dependent protein kinase, isozyme 2 forms cD4/T1/T3A/T3B 1
cGMP-dependent protein kinase, isozyme 2 forms cD5/T2 1

Protein length

Unique protein length 210

Protein length distribution