Orthogroup:group_1740


Homologs in group_1740

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12135 FBDBKF_12135 Morganella morganii S1 yijD YijD family membrane protein
EHELCC_14170 EHELCC_14170 Morganella morganii S2 yijD YijD family membrane protein
NLDBIP_15265 NLDBIP_15265 Morganella morganii S4 yijD YijD family membrane protein
LHKJJB_15345 LHKJJB_15345 Morganella morganii S3 yijD YijD family membrane protein
HKOGLL_14465 HKOGLL_14465 Morganella morganii S5 yijD YijD family membrane protein
F4V73_RS16930 F4V73_RS16930 Morganella psychrotolerans - YijD family membrane protein
PMI_RS16040 PMI_RS16040 Proteus mirabilis HI4320 - YijD family membrane protein

Distribution of group_1740 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1740 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1740

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1740.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yijD 5
2 - 2

Product

# Product Occurence
1 YijD family membrane protein 7

Pfam domain Annotation(s)

Domain ID Occurences Description
PF07226 7 Protein of unknown function (DUF1422)

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Inner membrane protein YijD 3

Protein length

Min length 124
Max length 133
Mean length (sd) 125.3 (3.4)
Median length 124.0

Protein length distribution