COG1765


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1765, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized OsmC-related protein
Function(s) descr. General function prediction only (R)

Occurence in the database

COG1765 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1697 FBDBKF_11840 18841 19248 -1 yhfA OsmC family protein Morganella morganii S1
1 group_1697 EHELCC_14465 115457 115864 1 yhfA OsmC family protein Morganella morganii S2
2 group_1697 NLDBIP_15560 119394 119801 1 yhfA OsmC family protein Morganella morganii S4
3 group_1697 LHKJJB_15050 18841 19248 -1 yhfA OsmC family protein Morganella morganii S3
4 group_1697 HKOGLL_14170 5504 5911 -1 yhfA OsmC family protein Morganella morganii S5
5 group_1697 F4V73_RS14810 198403 198810 1 OsmC family protein Morganella psychrotolerans
6 group_1697 PMI_RS13925 3093085 3093492 -1 OsmC family protein Proteus mirabilis HI4320
7 group_4650 PMI_RS14450 3206597 3207043 1 OsmC family protein Proteus mirabilis HI4320