Orthogroup:group_1727


Homologs in group_1727

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12055 FBDBKF_12055 Morganella morganii S1 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
EHELCC_14250 EHELCC_14250 Morganella morganii S2 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
NLDBIP_15345 NLDBIP_15345 Morganella morganii S4 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
LHKJJB_15265 LHKJJB_15265 Morganella morganii S3 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
HKOGLL_14385 HKOGLL_14385 Morganella morganii S5 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
F4V73_RS14590 F4V73_RS14590 Morganella psychrotolerans trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH
PMI_RS14160 PMI_RS14160 Proteus mirabilis HI4320 trmH tRNA (guanosine(18)-2'-O)-methyltransferase TrmH

Distribution of group_1727 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1727 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1727

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1727.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 trmH 7

Product

# Product Occurence
1 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0566 7 J Translation, ribosomal structure and biogenesis (J) tRNA G18 (ribose-2'-O)-methylase SpoU

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00556 7 tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00588 7 SpoU rRNA Methylase family
PF12105 7 SpoU, rRNA methylase, C-terminal

Annotations of the 113 SwissProt hits

Annotation Number of occurrences
23S rRNA (adenosine(1067)-2'-O)-methyltransferase 2
23S rRNA (guanosine(2553)-2'-O)-methyltransferase RlmP 1
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB 37
23S rRNA (uridine(2479)-2'-O)-methyltransferase 1
Probable methyltransferase TARBP1 1
Putative RNA (cytidine(34)-2'-O)-methyltransferase 1
Putative TrmH family tRNA/rRNA methyltransferase 11
Putative TrmH family tRNA/rRNA methyltransferase YacO 1
Putative tRNA (cytidine(34)-2'-O)-methyltransferase 6
Uncharacterized tRNA/rRNA methyltransferase AF_2399 1
Uncharacterized tRNA/rRNA methyltransferase BB_0516 1
Uncharacterized tRNA/rRNA methyltransferase BCG_3644c 1
Uncharacterized tRNA/rRNA methyltransferase MAB_0572 1
Uncharacterized tRNA/rRNA methyltransferase MAP_0479 1
Uncharacterized tRNA/rRNA methyltransferase MAV_0574 1
Uncharacterized tRNA/rRNA methyltransferase MG252 1
Uncharacterized tRNA/rRNA methyltransferase MG252 homolog 1
Uncharacterized tRNA/rRNA methyltransferase ML0324 1
Uncharacterized tRNA/rRNA methyltransferase MLBr00324 1
Uncharacterized tRNA/rRNA methyltransferase MMAR_5079 1
Uncharacterized tRNA/rRNA methyltransferase MRA_3618 1
Uncharacterized tRNA/rRNA methyltransferase MSMEG_6073/MSMEI_5913 1
Uncharacterized tRNA/rRNA methyltransferase MT0904 1
Uncharacterized tRNA/rRNA methyltransferase MT3685 1
Uncharacterized tRNA/rRNA methyltransferase MUL_4155 1
Uncharacterized tRNA/rRNA methyltransferase Mb0905 1
Uncharacterized tRNA/rRNA methyltransferase Mb3610c 1
Uncharacterized tRNA/rRNA methyltransferase Mflv_1447 1
Uncharacterized tRNA/rRNA methyltransferase Mjls_5122 1
Uncharacterized tRNA/rRNA methyltransferase Mkms_4822 1
Uncharacterized tRNA/rRNA methyltransferase Mmcs_4736 1
Uncharacterized tRNA/rRNA methyltransferase Mvan_5337 1
Uncharacterized tRNA/rRNA methyltransferase Rv0881 1
Uncharacterized tRNA/rRNA methyltransferase Rv3579c 1
Uncharacterized tRNA/rRNA methyltransferase YfiF 2
Uncharacterized tRNA/rRNA methyltransferase slr0955 1
Uncharacterized tRNA/rRNA methyltransferase slr1673 1
rRNA methyltransferase 1, mitochondrial 4
rRNA methyltransferase 3, mitochondrial 2
rRNA methyltransferase 3A, mitochondrial 1
rRNA methyltransferase 3B, mitochondrial 1
tRNA (cytidine(34)-2'-O)-methyltransferase 6
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ 1
tRNA (guanosine(18)-2'-O)-methyltransferase 8

Protein length

Min length 217
Max length 239
Mean length (sd) 222.6 (9.6)
Median length 217.0

Protein length distribution