Orthogroup:group_1711


Homologs in group_1711

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_11935 FBDBKF_11935 Morganella morganii S1 rlmJ 23S rRNA A2030 N6-methylase RlmJ
EHELCC_14370 EHELCC_14370 Morganella morganii S2 rlmJ 23S rRNA A2030 N6-methylase RlmJ
NLDBIP_15465 NLDBIP_15465 Morganella morganii S4 rlmJ 23S rRNA A2030 N6-methylase RlmJ
LHKJJB_15145 LHKJJB_15145 Morganella morganii S3 rlmJ 23S rRNA A2030 N6-methylase RlmJ
HKOGLL_14265 HKOGLL_14265 Morganella morganii S5 rlmJ 23S rRNA A2030 N6-methylase RlmJ
F4V73_RS14730 F4V73_RS14730 Morganella psychrotolerans - 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ
PMI_RS14010 PMI_RS14010 Proteus mirabilis HI4320 - 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ

Distribution of group_1711 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1711 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1711

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1711.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rlmJ 5
2 - 2

Product

# Product Occurence
1 23S rRNA A2030 N6-methylase RlmJ 5
2 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2961 7 J Translation, ribosomal structure and biogenesis (J) 23S rRNA A2030 N6-methylase RlmJ

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07115 7 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04378 7 Ribosomal RNA large subunit methyltransferase D, RlmJ

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Ribosomal RNA large subunit methyltransferase J 2

Protein length

Unique protein length 280

Protein length distribution