Orthogroup:group_1630


Homologs in group_1630

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10735 FBDBKF_10735 Morganella morganii S1 greB transcription elongation factor GreB
EHELCC_15070 EHELCC_15070 Morganella morganii S2 greB transcription elongation factor GreB
NLDBIP_14900 NLDBIP_14900 Morganella morganii S4 greB transcription elongation factor GreB
LHKJJB_14445 LHKJJB_14445 Morganella morganii S3 greB transcription elongation factor GreB
HKOGLL_13065 HKOGLL_13065 Morganella morganii S5 greB transcription elongation factor GreB
F4V73_RS14450 F4V73_RS14450 Morganella psychrotolerans greB transcription elongation factor GreB
PMI_RS14285 PMI_RS14285 Proteus mirabilis HI4320 greB transcription elongation factor GreB

Distribution of group_1630 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1630 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1630

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1630.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 greB 7

Product

# Product Occurence
1 transcription elongation factor GreB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0782 7 K Transcription (K) Transcription elongation factor, GreA/GreB family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04760 7 transcription elongation factor GreB - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01272 7 Transcription elongation factor, GreA/GreB, C-term
PF03449 7 Transcription elongation factor, N-terminal

Annotations of the 363 SwissProt hits

Annotation Number of occurrences
Transcription elongation factor GreA 338
Transcription elongation factor GreA 1 1
Transcription elongation factor GreA 2 1
Transcription elongation factor GreB 20
Uncharacterized protein MT3896 1
Uncharacterized protein Mb3817 1
Uncharacterized protein Rv3788 1

Protein length

Min length 159
Max length 161
Mean length (sd) 160.7 (0.8)
Median length 161.0

Protein length distribution