Orthogroup:group_1617


Homologs in group_1617

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10165 FBDBKF_10165 Morganella morganii S1 proW glycine betaine/L-proline ABC transporter permease ProW
EHELCC_04965 EHELCC_04965 Morganella morganii S2 proW glycine betaine/L-proline ABC transporter permease ProW
NLDBIP_04965 NLDBIP_04965 Morganella morganii S4 proW glycine betaine/L-proline ABC transporter permease ProW
LHKJJB_13665 LHKJJB_13665 Morganella morganii S3 proW glycine betaine/L-proline ABC transporter permease ProW
HKOGLL_12870 HKOGLL_12870 Morganella morganii S5 proW glycine betaine/L-proline ABC transporter permease ProW
F4V73_RS00175 F4V73_RS00175 Morganella psychrotolerans proW glycine betaine/L-proline ABC transporter permease ProW
PMI_RS02025 PMI_RS02025 Proteus mirabilis HI4320 proW glycine betaine/L-proline ABC transporter permease ProW

Distribution of group_1617 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1617 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1617

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1617.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 proW 7

Product

# Product Occurence
1 glycine betaine/L-proline ABC transporter permease ProW 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4176 7 E Amino acid transport and metabolism (E) ABC-type proline/glycine betaine transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02001 7 glycine betaine/proline transport system permease protein ABC transporters -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component

Annotations of the 60 SwissProt hits

Annotation Number of occurrences
Bicarbonate transport system permease protein CmpB 3
Carnitine transport permease protein OpuCB 2
Carnitine transport permease protein OpuCD 2
Choline transport system permease protein OpuBB 1
Choline transport system permease protein OpuBD 1
D-methionine transport system permease protein MetI 5
Diacetylchitobiose uptake system permease protein NgcG 1
Ergothioneine transport permease/ergothioneine binding protein EgtU 1
Ergothioneine transporter EgtUBC 1
Formylaminopyrimidine transport permease protein ThiX 1
Glutathione transport system permease protein GsiD 1
Glycine betaine transport system permease protein OpuAB 1
Glycine betaine uptake system permease protein YehW 1
Glycine betaine uptake system permease protein YehY 1
Glycine betaine/carnitine transport permease protein GbuB 1
Glycine betaine/carnitine/choline transport system permease protein OpuCB 1
Glycine betaine/carnitine/choline transport system permease protein OpuCD 1
Glycine betaine/choline transport system permease protein OusW 1
Glycine betaine/proline betaine transport system permease protein ProW 2
Methionine import system permease protein MetP 1
Nitrate import permease protein NrtB 3
Osmoprotectant import permease protein OsmW 1
Osmoprotectant import permease protein OsmY 1
Phosphate transport system permease protein PstA 2
Probable ABC transporter permease protein BAB2_1148 1
Probable ABC transporter permease protein BMEII0107 1
Probable ABC transporter permease protein BRA1188/BS1330_II1179 1
Probable ABC transporter permease protein BruAb2_1124 1
Probable ABC transporter permease protein HI_0355 1
Probable ABC transporter permease protein YqgI 1
Probable D-methionine transport system permease protein MetI 3
Probable ergothioneine transporter EgtUBC 3
Putative ABC transporter permease protein MJ0413 1
Putative aliphatic sulfonates transport permease protein SsuC 2
Riboflavin transport system permease protein RibX 1
Spermidine/putrescine transport system permease protein PotB 1
Spermidine/putrescine transport system permease protein PotC 4
Taurine transport system permease protein TauC 1
Trimethylamine N-oxide transport system permease protein TmoV 2

Protein length

Min length 370
Max length 409
Mean length (sd) 382.0 (12.4)
Median length 379.0

Protein length distribution