Orthogroup:group_1617



Homologs in group_1617

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10665 FBDBKF_10665 Morganella morganii S1 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
EHELCC_15000 EHELCC_15000 Morganella morganii S2 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
NLDBIP_14830 NLDBIP_14830 Morganella morganii S4 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
LHKJJB_14515 LHKJJB_14515 Morganella morganii S3 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
HKOGLL_13135 HKOGLL_13135 Morganella morganii S5 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
F4V73_RS14375 F4V73_RS14375 Morganella psychrotolerans - DNA-3-methyladenine glycosylase 2
PMI_RS05980 PMI_RS05980 Proteus mirabilis HI4320 - DNA-3-methyladenine glycosylase

Distribution of group_1617 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1617 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1617

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1617.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 alkA 5
2 - 2

Product

# Product Occurence
1 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 5
2 DNA-3-methyladenine glycosylase 2 1
3 DNA-3-methyladenine glycosylase 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0122 7 L Replication, recombination and repair (L) 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01247 1 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] Base excision repair -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00730 7 HhH-GPD superfamily base excision DNA repair protein

Annotations of the 8 SwissProt hits

Annotation Number of occurrences
Alkylbase DNA glycosidase-like protein mag2 1
DNA-3-methyladenine glycosylase 2
DNA-3-methyladenine glycosylase 1 1
DNA-3-methyladenine glycosylase 2 1
Probable bifunctional transcriptional activator/DNA repair enzyme AlkA 2
Putative DNA-3-methyladenine glycosylase YfjP 1

Protein length

Min length 203
Max length 303
Mean length (sd) 288.6 (37.7)
Median length 303.0

Protein length distribution