Orthogroup:group_1616



Homologs in group_1616

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10660 FBDBKF_10660 Morganella morganii S1 poxB ubiquinone-dependent pyruvate dehydrogenase
EHELCC_14995 EHELCC_14995 Morganella morganii S2 poxB ubiquinone-dependent pyruvate dehydrogenase
NLDBIP_14825 NLDBIP_14825 Morganella morganii S4 poxB ubiquinone-dependent pyruvate dehydrogenase
LHKJJB_14520 LHKJJB_14520 Morganella morganii S3 poxB ubiquinone-dependent pyruvate dehydrogenase
HKOGLL_13140 HKOGLL_13140 Morganella morganii S5 poxB ubiquinone-dependent pyruvate dehydrogenase
F4V73_RS14370 F4V73_RS14370 Morganella psychrotolerans poxB ubiquinone-dependent pyruvate dehydrogenase
PMI_RS15995 PMI_RS15995 Proteus mirabilis HI4320 poxB ubiquinone-dependent pyruvate dehydrogenase

Distribution of group_1616 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1616 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1616

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1616.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 poxB 7

Product

# Product Occurence
1 ubiquinone-dependent pyruvate dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0028 7 EH Amino acid transport and metabolism (E)
Coenzyme transport and metabolism (H)
Acetolactate synthase large subunit or other thiamine pyrophosphate-requiring enzyme

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K00156 7 pyruvate dehydrogenase (quinone) [EC:1.2.5.1] Pyruvate metabolism
Metabolic pathways
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00205 7 Thiamine pyrophosphate enzyme, central domain
PF02775 7 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
PF02776 7 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

Annotations of the 151 SwissProt hits

Annotation Number of occurrences
2-hydroxyacyl-CoA lyase 5
2-hydroxyacyl-CoA lyase 1 4
2-hydroxyacyl-CoA lyase 2 5
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase 1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase 23
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase 1 1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase 2 1
Acetolactate synthase 4
Acetolactate synthase (Fragment) 1
Acetolactate synthase 1, chloroplastic 4
Acetolactate synthase 2, chloroplastic 3
Acetolactate synthase 3, chloroplastic 1
Acetolactate synthase catalytic subunit, mitochondrial 2
Acetolactate synthase isozyme 1 large subunit 1
Acetolactate synthase isozyme 2 large subunit 1
Acetolactate synthase isozyme 3 large subunit 2
Acetolactate synthase large subunit 14
Acetolactate synthase large subunit IlvB1 2
Acetolactate synthase large subunit IlvG 2
Acetolactate synthase, catabolic 2
Acetolactate synthase, chloroplastic 1
Acetolactate synthase, mitochondrial 3
Alpha-keto-acid decarboxylase 8
Benzaldehyde lyase 1
Benzoylformate decarboxylase 2
Cyclohexane-1,2-dione hydrolase 1
Glyoxylate carboligase 2
Indole-3-pyruvate decarboxylase 2
N(2)-(2-carboxyethyl)arginine synthase 1
Oxalyl-CoA decarboxylase 3
Probable 2-ketoarginine decarboxylase AruI 1
Probable acetolactate synthase 1
Probable acetolactate synthase 2, chloroplastic 1
Probable acetolactate synthase large subunit 2
Probable pyruvate decarboxylase C186.09 1
Probable pyruvate decarboxylase C1F8.07c 1
Probable sulfoacetaldehyde acetyltransferase 1
Putative acetolactate synthase isozyme 2 large subunit 1
Putative acetolactate synthase large subunit IlvB2 1
Putative acetolactate synthase large subunit IlvX 1
Putative pyruvate decarboxylase C13A11.06 1
Putative pyruvate decarboxylase C3G9.11c 1
Putative thiamine pyrophosphate-containing protein YdaP 1
Putative uncharacterized protein HI_0737 1
Pyruvate decarboxylase 11
Pyruvate decarboxylase 1 4
Pyruvate decarboxylase 2 2
Pyruvate decarboxylase 3 1
Pyruvate decarboxylase 4 1
Pyruvate decarboxylase isozyme 1 1
Pyruvate decarboxylase isozyme 2 1
Pyruvate decarboxylase isozyme 3 1
Pyruvate dehydrogenase [ubiquinone] 1
Pyruvate oxidase 2
Sulfoacetaldehyde acetyltransferase 5
Thiamine metabolism regulatory protein THI3 1
Uncharacterized 42.6 kDa protein in isoamylase 3'region 1
Uncharacterized protein MJ0663 1

Protein length

Min length 573
Max length 574
Mean length (sd) 573.1 (0.4)
Median length 573.0

Protein length distribution