COG4175

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG4175
Protein list: lists the 7 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description ABC-type proline/glycine betaine transport system, ATPase component
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG4175 is associated with 7 different proteins
The 7 proteins are classified into 1 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1616 FBDBKF_10160 123142 124347 1 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV Morganella morganii S1
1 group_1616 EHELCC_04960 315107 316312 1 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV Morganella morganii S2
2 group_1616 NLDBIP_04960 314903 316108 1 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV Morganella morganii S4
3 group_1616 LHKJJB_13670 19270 20475 -1 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV Morganella morganii S3
4 group_1616 HKOGLL_12865 123923 125128 1 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV Morganella morganii S5
5 group_1616 F4V73_RS00180 46832 48037 -1 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV Morganella psychrotolerans
6 group_1616 PMI_RS02030 479797 480996 -1 proV glycine betaine/L-proline ABC transporter ATP-binding protein ProV Proteus mirabilis HI4320