Orthogroup:group_1614



Homologs in group_1614

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10635 FBDBKF_10635 Morganella morganii S1 phrB deoxyribodipyrimidine photo-lyase
EHELCC_14970 EHELCC_14970 Morganella morganii S2 phrB deoxyribodipyrimidine photo-lyase
NLDBIP_14800 NLDBIP_14800 Morganella morganii S4 phrB deoxyribodipyrimidine photo-lyase
LHKJJB_14545 LHKJJB_14545 Morganella morganii S3 phrB deoxyribodipyrimidine photo-lyase
HKOGLL_13165 HKOGLL_13165 Morganella morganii S5 phrB deoxyribodipyrimidine photo-lyase
F4V73_RS14345 F4V73_RS14345 Morganella psychrotolerans phrB deoxyribodipyrimidine photo-lyase
PMI_RS15965 PMI_RS15965 Proteus mirabilis HI4320 phrB deoxyribodipyrimidine photo-lyase

Distribution of group_1614 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1614 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1614

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1614.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 phrB 7

Product

# Product Occurence
1 deoxyribodipyrimidine photo-lyase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0415 7 L Replication, recombination and repair (L) Deoxyribodipyrimidine photolyase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01669 7 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00875 7 DNA photolyase
PF03441 7 FAD binding domain of DNA photolyase

Annotations of the 55 SwissProt hits

Annotation Number of occurrences
(6-4)DNA photolyase 2
Cryptochrome DASH 9
Cryptochrome DASH, chloroplastic/mitochondrial 4
Cryptochrome-1 15
Cryptochrome-2 5
Cryptochrome-like protein cry2 1
Deoxyribodipyrimidine photo-lyase 15
Deoxyribodipyrimidine photo-lyase, mitochondrial 1
Putative cryptochrome DASH 1
Putative cryptochrome DASH, mitochondrial 1
Uncharacterized 31.6 kDa protein in atpI 5'region 1

Protein length

Min length 476
Max length 479
Mean length (sd) 478.3 (1.3)
Median length 479.0

Protein length distribution