COG0209

Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0209, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Ribonucleotide reductase alpha subunit
Function(s) descr. Nucleotide transport and metabolism (F)

Occurence in the database

COG0209 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_221 FBDBKF_00400 58179 60473 1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S1
1 group_1566 FBDBKF_10150 119430 121550 1 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S1
2 group_221 EHELCC_01145 248395 250689 -1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S2
3 group_1566 EHELCC_04950 311395 313515 1 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S2
4 group_221 NLDBIP_02315 429447 431741 1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S4
5 group_1566 NLDBIP_04950 311191 313311 1 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S4
6 group_221 LHKJJB_03830 36688 38982 1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S3
7 group_1566 LHKJJB_13680 22067 24187 -1 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S3
8 group_221 HKOGLL_03215 248600 250894 -1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S5
9 group_1566 HKOGLL_12855 120211 122331 1 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha Morganella morganii S5
10 group_1566 F4V73_RS00190 49630 51750 -1 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha Morganella psychrotolerans
11 group_221 F4V73_RS06380 1330639 1332936 1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha Morganella psychrotolerans
12 group_221 F4V73_RS17910 23659 25947 -1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha Morganella psychrotolerans
13 group_1566 PMI_RS02040 482599 484725 -1 nrdE class 1b ribonucleoside-diphosphate reductase subunit alpha Proteus mirabilis HI4320
14 group_221 PMI_RS08510 1855565 1857856 1 nrdA class 1a ribonucleoside-diphosphate reductase subunit alpha Proteus mirabilis HI4320