Orthogroup:group_1560



Homologs in group_1560

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10105 FBDBKF_10105 Morganella morganii S1 lipB lipoyl(octanoyl) transferase LipB
EHELCC_04905 EHELCC_04905 Morganella morganii S2 lipB lipoyl(octanoyl) transferase LipB
NLDBIP_04905 NLDBIP_04905 Morganella morganii S4 lipB lipoyl(octanoyl) transferase LipB
LHKJJB_13725 LHKJJB_13725 Morganella morganii S3 lipB lipoyl(octanoyl) transferase LipB
HKOGLL_12810 HKOGLL_12810 Morganella morganii S5 lipB lipoyl(octanoyl) transferase LipB
F4V73_RS00230 F4V73_RS00230 Morganella psychrotolerans lipB lipoyl(octanoyl) transferase LipB
PMI_RS02075 PMI_RS02075 Proteus mirabilis HI4320 lipB lipoyl(octanoyl) transferase LipB

Distribution of group_1560 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1560 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1560

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1560.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lipB 7

Product

# Product Occurence
1 lipoyl(octanoyl) transferase LipB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0321 7 H Coenzyme transport and metabolism (H) Lipoate-protein ligase B

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF21948 7 Lipoyl protein ligase A/B catalytic domain

Annotations of the 443 SwissProt hits

Annotation Number of occurrences
Octanoyl-[acyl-carrier-protein]:protein N-octanoyltransferase LIPT2, mitochondrial 4
Octanoyltransferase 424
Octanoyltransferase (Fragment) 2
Octanoyltransferase LIP2, mitochondrial 1
Octanoyltransferase LIP2p, chloroplastic 1
Octanoyltransferase LIP2p2, chloroplastic 1
Octanoyltransferase, mitochondrial 2
Probable octanoyltransferase 5
Probable octanoyltransferase 1 1
Probable octanoyltransferase 2 1
Putative lipoyltransferase 2, mitochondrial 1

Protein length

Min length 210
Max length 214
Mean length (sd) 210.9 (1.6)
Median length 210.0

Protein length distribution