Orthogroup:group_1550


Homologs in group_1550

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10040 FBDBKF_10040 Morganella morganii S1 lptE LPS assembly lipoprotein LptE
EHELCC_04840 EHELCC_04840 Morganella morganii S2 lptE LPS assembly lipoprotein LptE
NLDBIP_04840 NLDBIP_04840 Morganella morganii S4 lptE LPS assembly lipoprotein LptE
LHKJJB_13790 LHKJJB_13790 Morganella morganii S3 lptE LPS assembly lipoprotein LptE
HKOGLL_12745 HKOGLL_12745 Morganella morganii S5 lptE LPS assembly lipoprotein LptE
F4V73_RS00295 F4V73_RS00295 Morganella psychrotolerans lptE LPS assembly lipoprotein LptE
PMI_RS02130 PMI_RS02130 Proteus mirabilis HI4320 lptE LPS assembly lipoprotein LptE

Distribution of group_1550 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1550 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1550

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1550.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lptE 7

Product

# Product Occurence
1 LPS assembly lipoprotein LptE 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2980 7 M Cell wall/membrane/envelope biogenesis (M) Outer membrane lipoprotein LptE/RlpB (LPS assembly)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03643 7 LPS-assembly lipoprotein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04390 7 Lipopolysaccharide-assembly

Annotations of the 56 SwissProt hits

Annotation Number of occurrences
LPS-assembly lipoprotein LptE 56

Protein length

Min length 182
Max length 184
Mean length (sd) 183.7 (0.8)
Median length 184.0

Protein length distribution