Homologs in group_1550

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_04505 EHELCC_04505 100.0 Morganella morganii S2 pnuC nicotinamide riboside transporter PnuC
NLDBIP_04505 NLDBIP_04505 100.0 Morganella morganii S4 pnuC nicotinamide riboside transporter PnuC
LHKJJB_14125 LHKJJB_14125 100.0 Morganella morganii S3 pnuC nicotinamide riboside transporter PnuC
HKOGLL_12410 HKOGLL_12410 100.0 Morganella morganii S5 pnuC nicotinamide riboside transporter PnuC
F4V73_RS00635 F4V73_RS00635 86.3 Morganella psychrotolerans pnuC nicotinamide riboside transporter PnuC
PMI_RS02900 PMI_RS02900 70.7 Proteus mirabilis HI4320 pnuC nicotinamide riboside transporter PnuC

Distribution of the homologs in the orthogroup group_1550

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1550

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24520 5.17e-101 296 66 1 232 2 pnuC Nicotinamide riboside transporter PnuC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AFK3 8.98e-100 293 67 1 232 3 pnuC Nicotinamide riboside transporter PnuC Shigella flexneri
P0AFK2 8.98e-100 293 67 1 232 1 pnuC Nicotinamide riboside transporter PnuC Escherichia coli (strain K12)
D2ZZC1 7.03e-16 77 27 7 220 1 pnuC Nicotinamide riboside transporter PnuC Neisseria mucosa (strain ATCC 25996 / DSM 4631 / NCTC 10774 / M26)
Q57425 3.12e-08 55 24 6 217 1 pnuC Nicotinamide riboside transporter PnuC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
K4REQ6 0.000527 43 23 6 207 1 ribM Riboflavin/roseoflavin transporter RibM Streptomyces davaonensis (strain DSM 101723 / JCM 4913 / KCC S-0913 / 768)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_09705
Feature type CDS
Gene pnuC
Product nicotinamide riboside transporter PnuC
Location 40376 - 41077 (strand: -1)
Length 702 (nucleotides) / 233 (amino acids)
In genomic island -

Contig

Accession contig_11
Length 143616 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1550
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04973 Nicotinamide mononucleotide transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3201 Coenzyme transport and metabolism (H) H Nicotinamide riboside transporter PnuC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03811 nicotinamide mononucleotide transporter - -

Protein Sequence

MEFFDINNILVVIPYWKEGSYALSWIEAVGATAGLLCIWLASLEKTINYLFGLINVTLFAVIFFQIQLYANLLLQIFFFAANIYGWYAWSRQNEKAEAELKIRWMPLRQTAVIAAVSLAAILLLARFIDPVFTWLAQSMVSILNAAGADLAMPVLLPDAFPFWDAAMTVLSVVAMILMTRKLVENWLLWVVINMISIVIYALQGVYALSLEYIILLGVALNGSRMWIKAAKQP

Flanking regions ( +/- flanking 50bp)

TCAGTGGCTGGCCGCCGGTGACAGGAAATATACTTAACACAGGTGACGGAATGGAATTTTTTGATATTAATAATATTCTCGTGGTGATCCCTTACTGGAAAGAAGGGTCTTATGCGCTGTCCTGGATTGAAGCGGTGGGAGCAACCGCCGGGTTGTTATGTATCTGGCTGGCAAGCCTGGAAAAAACAATCAATTATCTGTTTGGCCTGATTAACGTCACGCTGTTTGCGGTGATTTTCTTTCAGATTCAGCTCTATGCCAATCTGCTGCTGCAGATTTTCTTTTTCGCCGCCAATATTTACGGCTGGTATGCCTGGAGCCGGCAAAATGAGAAAGCGGAAGCGGAGCTGAAAATCCGCTGGATGCCGCTGCGGCAGACTGCTGTGATTGCGGCAGTTTCTCTGGCAGCGATTTTACTGCTGGCGCGTTTTATCGACCCGGTCTTTACGTGGCTGGCACAGAGCATGGTCAGTATACTGAATGCCGCAGGGGCTGATCTGGCAATGCCGGTATTGCTGCCCGATGCTTTCCCGTTCTGGGATGCAGCCATGACGGTATTGTCTGTGGTGGCGATGATCCTGATGACCCGCAAACTGGTGGAAAACTGGCTGCTGTGGGTGGTTATCAATATGATCAGTATTGTGATTTATGCCCTTCAGGGTGTGTACGCGCTGTCGCTGGAATATATTATCCTGCTGGGTGTGGCGCTCAACGGTTCGCGGATGTGGATAAAAGCAGCGAAGCAGCCGTAAAACTATTTTCAGTGCAATAACCGGGGGATTATAATGAGAGTCCGGTAATA