Orthogroup:group_1542


Homologs in group_1542

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09995 FBDBKF_09995 Morganella morganii S1 trxA Thiol-disulfide isomerase or thioredoxin
EHELCC_04795 EHELCC_04795 Morganella morganii S2 trxA Thiol-disulfide isomerase or thioredoxin
NLDBIP_04795 NLDBIP_04795 Morganella morganii S4 trxA Thiol-disulfide isomerase or thioredoxin
LHKJJB_13835 LHKJJB_13835 Morganella morganii S3 trxA Thiol-disulfide isomerase or thioredoxin
HKOGLL_12700 HKOGLL_12700 Morganella morganii S5 trxA Thiol-disulfide isomerase or thioredoxin
F4V73_RS00340 F4V73_RS00340 Morganella psychrotolerans - protein disulfide oxidoreductase
PMI_RS02175 PMI_RS02175 Proteus mirabilis HI4320 - protein disulfide oxidoreductase

Distribution of group_1542 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1542 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1542

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1542.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 trxA 5
2 - 2

Product

# Product Occurence
1 Thiol-disulfide isomerase or thioredoxin 5
2 protein disulfide oxidoreductase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0526 7 O Posttranslational modification, protein turnover, chaperones (O) Thiol-disulfide isomerase or thioredoxin

Pfam domain Annotation(s)

Domain ID Occurences Description
PF08534 7 Redoxin

Annotations of the 136 SwissProt hits

Annotation Number of occurrences
Bifunctional thioredoxin reductase/thioredoxin 1
Peptide methionine sulfoxide reductase MsrA/MsrB 3
Probable thiol-disulfide oxidoreductase ResA 1
Protein disulfide-isomerase 7
Putative peroxiredoxin MT2597 1
Putative peroxiredoxin Rv2521 1
Putative protein disulfide-isomerase C1F5.02 1
Soluble secreted antigen MPT53 3
Sporulation thiol-disulfide oxidoreductase A 1
TPR repeat-containing thioredoxin TDX 1
Thiol-disulfide oxidoreductase ResA 9
Thiol-disulfide oxidoreductase YkuV 1
Thiol:disulfide interchange protein CycY 1
Thiol:disulfide interchange protein DsbE 8
Thiol:disulfide interchange protein DsbE homolog 1
Thiol:disulfide interchange protein HelX 1
Thioredoxin 38
Thioredoxin (Fragment) 2
Thioredoxin 1 11
Thioredoxin 2 5
Thioredoxin Asp f 28 1
Thioredoxin C-1 1
Thioredoxin C-2 1
Thioredoxin F, chloroplastic 1
Thioredoxin F-type, chloroplastic 3
Thioredoxin F1, chloroplastic 1
Thioredoxin F2, chloroplastic 1
Thioredoxin H-type 1
Thioredoxin H-type 2 1
Thioredoxin H1 1
Thioredoxin H3 1
Thioredoxin H4 1
Thioredoxin M-type, chloroplastic 6
Thioredoxin M1, chloroplastic 2
Thioredoxin M2, chloroplastic 2
Thioredoxin M3, chloroplastic 1
Thioredoxin M4, chloroplastic 1
Thioredoxin M5, chloroplastic 1
Thioredoxin Y, chloroplastic 1
Thioredoxin Y1, chloroplastic 1
Thioredoxin Y2, chloroplastic 1
Thioredoxin, mitochondrial 1
Thioredoxin-2 2
Thioredoxin-2, mitochondrial 1
Thioredoxin-T 1
Thioredoxin-like protein HI_1115 1
Thioredoxin-like protein YneN 1
Thioredoxin-like protein slr0233 1
Thioredoxin-like protein slr1139 1

Protein length

Min length 167
Max length 168
Mean length (sd) 167.7 (0.5)
Median length 168.0

Protein length distribution