Orthogroup:group_1457



Homologs in group_1457

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09285 FBDBKF_09285 Morganella morganii S1 - IpaD/SipD/SspD family type III secretion system needle tip protein
EHELCC_10125 EHELCC_10125 Morganella morganii S2 - IpaD/SipD/SspD family type III secretion system needle tip protein
NLDBIP_10470 NLDBIP_10470 Morganella morganii S4 - IpaD/SipD/SspD family type III secretion system needle tip protein
LHKJJB_10885 LHKJJB_10885 Morganella morganii S3 - IpaD/SipD/SspD family type III secretion system needle tip protein
HKOGLL_13945 HKOGLL_13945 Morganella morganii S5 - IpaD/SipD/SspD family type III secretion system needle tip protein
F4V73_RS10680 F4V73_RS10680 Morganella psychrotolerans - hypothetical protein
PMI_RS13210 PMI_RS13210 Proteus mirabilis HI4320 - IpaD/SipD/SspD family type III secretion system needle tip protein

Distribution of group_1457 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1457 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1457

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1457.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 IpaD/SipD/SspD family type III secretion system needle tip protein 6
2 hypothetical protein 1

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13287 1 invasin D Bacterial invasion of epithelial cells
Shigellosis
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06511 1 Type III secretion systems tip complex components

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
Cell invasion protein SipD 3
Invasin IpaD 2

Protein length

Min length 348
Max length 495
Mean length (sd) 473.6 (55.4)
Median length 495.0

Protein length distribution