Homologs in group_1401

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08645 FBDBKF_08645 90.2 Morganella morganii S1 secG preprotein translocase subunit SecG
EHELCC_12880 EHELCC_12880 90.2 Morganella morganii S2 secG preprotein translocase subunit SecG
NLDBIP_13220 NLDBIP_13220 90.2 Morganella morganii S4 secG preprotein translocase subunit SecG
LHKJJB_13335 LHKJJB_13335 90.2 Morganella morganii S3 secG preprotein translocase subunit SecG
HKOGLL_11695 HKOGLL_11695 90.2 Morganella morganii S5 secG preprotein translocase subunit SecG
PMI_RS17000 PMI_RS17000 54.5 Proteus mirabilis HI4320 secG preprotein translocase subunit SecG

Distribution of the homologs in the orthogroup group_1401

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1401

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AG99 3.26e-50 157 69 1 111 1 secG Protein-export membrane protein SecG Escherichia coli (strain K12)
P0AGA0 3.26e-50 157 69 1 111 3 secG Protein-export membrane protein SecG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AGA1 3.26e-50 157 69 1 111 3 secG Protein-export membrane protein SecG Escherichia coli O157:H7
Q9HV52 7.6e-25 94 47 3 121 3 secG Protein-export membrane protein SecG Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9CP52 2e-22 87 53 4 116 3 secG Protein-export membrane protein SecG Pasteurella multocida (strain Pm70)
P44713 3.51e-22 86 55 3 113 3 secG Protein-export membrane protein SecG Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P95577 3.86e-21 84 45 3 119 3 secG Protein-export membrane protein SecG Pseudomonas syringae pv. syringae (strain B728a)
P57460 5.33e-11 58 29 2 112 3 secG Protein-export membrane protein SecG Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
O66505 8.03e-06 44 41 1 55 1 secG Protein-export membrane protein SecG Aquifex aeolicus (strain VF5)
Q7A1F4 2.27e-05 42 37 2 75 3 secG Probable protein-export membrane protein SecG Staphylococcus aureus (strain MW2)
Q6GB52 2.27e-05 42 37 2 75 3 secG Probable protein-export membrane protein SecG Staphylococcus aureus (strain MSSA476)
Q7A6Q1 2.27e-05 42 37 2 75 3 secG Probable protein-export membrane protein SecG Staphylococcus aureus (strain N315)
Q99VK3 2.27e-05 42 37 2 75 3 secG Probable protein-export membrane protein SecG Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HHN9 2.27e-05 42 37 2 75 3 secG Probable protein-export membrane protein SecG Staphylococcus aureus (strain COL)
Q8CPY2 4.16e-05 42 41 2 68 3 secG Probable protein-export membrane protein SecG Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HQU8 4.16e-05 42 41 2 68 3 secG Probable protein-export membrane protein SecG Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q6GIL2 4.99e-05 42 37 2 75 3 secG Probable protein-export membrane protein SecG Staphylococcus aureus (strain MRSA252)
Q2G026 5.21e-05 42 37 2 75 3 SAOUHSC_00801 Protein translocase subunit SecG Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q49W06 0.000238 40 38 2 70 3 secG Probable protein-export membrane protein SecG Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q4UNA3 0.000331 40 28 3 101 3 secG Protein-export membrane protein SecG Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
O32233 0.000365 39 36 2 75 2 secG Probable protein-export membrane protein SecG Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09870
Feature type CDS
Gene secG
Product preprotein translocase subunit SecG
Location 78726 - 79070 (strand: 1)
Length 345 (nucleotides) / 114 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1401
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03840 Preprotein translocase SecG subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1314 Intracellular trafficking, secretion, and vesicular transport (U) U Protein translocase subunit SecG

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03075 preprotein translocase subunit SecG Quorum sensing
Protein export
Bacterial secretion system		 -

Protein Sequence

MTFYTILLIVFLLVAIALVGMVLLQQGKGADMGASFGAGASATLFGSSGSGNFLTRTTGILGTLFFVLSLVLGNMTSNKVGTGSKFDNLAVPAQTEQKTDVPVAPAAPNSDIPR

Flanking regions ( +/- flanking 50bp)

GATTAATACCGAATCAGTCGGTATACCGTACGGGGAACAGGTATATAGTTATGACTTTTTATACAATACTCTTGATCGTTTTTTTACTTGTTGCGATTGCCTTAGTCGGCATGGTTTTGCTGCAGCAGGGTAAAGGTGCGGACATGGGTGCTTCGTTCGGTGCAGGCGCTTCTGCAACTCTGTTTGGTTCTTCAGGCTCAGGTAATTTCCTGACCCGCACGACCGGCATTTTAGGAACACTGTTTTTTGTACTGAGTTTAGTTCTGGGCAACATGACCAGCAATAAAGTCGGAACAGGCAGCAAGTTTGATAATCTCGCTGTGCCGGCGCAGACAGAACAGAAAACAGATGTACCCGTAGCACCAGCAGCACCTAACAGCGATATTCCACGCTGATTGTTGCAGGACCGGAAAGCAGTAACGTTTTAAAAACGGGATTGATATGA