Orthogroup:group_1423



Homologs in group_1423

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08785 FBDBKF_08785 Morganella morganii S1 nrdD anaerobic ribonucleoside-triphosphate reductase
EHELCC_12740 EHELCC_12740 Morganella morganii S2 nrdD anaerobic ribonucleoside-triphosphate reductase
NLDBIP_13080 NLDBIP_13080 Morganella morganii S4 nrdD anaerobic ribonucleoside-triphosphate reductase
LHKJJB_13475 LHKJJB_13475 Morganella morganii S3 nrdD anaerobic ribonucleoside-triphosphate reductase
HKOGLL_11555 HKOGLL_11555 Morganella morganii S5 nrdD anaerobic ribonucleoside-triphosphate reductase
F4V73_RS10000 F4V73_RS10000 Morganella psychrotolerans nrdD anaerobic ribonucleoside-triphosphate reductase
PMI_RS17200 PMI_RS17200 Proteus mirabilis HI4320 nrdD anaerobic ribonucleoside-triphosphate reductase

Distribution of group_1423 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1423 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1423

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1423.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 nrdD 7

Product

# Product Occurence
1 anaerobic ribonucleoside-triphosphate reductase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1328 7 F Nucleotide transport and metabolism (F) Anaerobic ribonucleoside-triphosphate reductase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K21636 7 ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] Purine metabolism
Pyrimidine metabolism
Metabolic pathways
Nucleotide metabolism
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Pfam domain Annotation(s)

Domain ID Occurences Description
PF03477 7 ATP cone domain
PF13597 7 Anaerobic ribonucleoside-triphosphate reductase

Annotations of the 12 SwissProt hits

Annotation Number of occurrences
Anaerobic ribonucleoside-triphosphate reductase 4
Ribonucleoside-diphosphate reductase subunit alpha 3
Uncharacterized protein MJ0832 1
Vitamin B12-dependent ribonucleoside-diphosphate reductase 4

Protein length

Min length 712
Max length 728
Mean length (sd) 723.4 (7.8)
Median length 728.0

Protein length distribution