Orthogroup:group_1352


Homologs in group_1352

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08380 FBDBKF_08380 Morganella morganii S1 rarD EamA family transporter RarD
EHELCC_13145 EHELCC_13145 Morganella morganii S2 rarD EamA family transporter RarD
NLDBIP_13485 NLDBIP_13485 Morganella morganii S4 rarD EamA family transporter RarD
LHKJJB_13070 LHKJJB_13070 Morganella morganii S3 rarD EamA family transporter RarD
HKOGLL_11960 HKOGLL_11960 Morganella morganii S5 rarD EamA family transporter RarD
F4V73_RS09580 F4V73_RS09580 Morganella psychrotolerans rarD EamA family transporter RarD
PMI_RS16625 PMI_RS16625 Proteus mirabilis HI4320 rarD EamA family transporter RarD

Distribution of group_1352 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1352 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1352

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1352.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rarD 7

Product

# Product Occurence
1 EamA family transporter RarD 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2962 7 R General function prediction only (R) Membrane protein RarD, contains two EamA domains, drug/metabolite transporter family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05786 7 chloramphenicol-sensitive protein RarD - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00892 7 EamA-like transporter family

Annotations of the 11 SwissProt hits

Annotation Number of occurrences
Chloramphenicol-sensitive protein RarD 1
Protein RarD 4
Uncharacterized transporter HI_0223 1
Uncharacterized transporter HI_0680 1
Uncharacterized transporter PA0485 1
Uncharacterized transporter PM1281 1
Uncharacterized transporter VC_0195 1
Uncharacterized transporter YojE 1

Protein length

Min length 297
Max length 298
Mean length (sd) 297.9 (0.4)
Median length 298.0

Protein length distribution