Homologs in group_1352

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_13725 EHELCC_13725 100.0 Morganella morganii S2 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
NLDBIP_14170 NLDBIP_14170 100.0 Morganella morganii S4 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
LHKJJB_08680 LHKJJB_08680 100.0 Morganella morganii S3 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
HKOGLL_08230 HKOGLL_08230 100.0 Morganella morganii S5 acrR DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
F4V73_RS13085 F4V73_RS13085 87.9 Morganella psychrotolerans - TetR/AcrR family transcriptional regulator
PMI_RS00740 PMI_RS00740 69.1 Proteus mirabilis HI4320 - TetR/AcrR family transcriptional regulator

Distribution of the homologs in the orthogroup group_1352

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1352

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_07895
Feature type CDS
Gene acrR
Product DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA
Location 108316 - 108963 (strand: 1)
Length 648 (nucleotides) / 215 (amino acids)
In genomic island -

Contig

Accession contig_8
Length 164760 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1352
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00440 Bacterial regulatory proteins, tetR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1309 Transcription (K) K DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Protein Sequence

MACTDDGAPYSGTRKRTFNLLVNTALALFEQGAMPSVSELAAEAGVSRATAYRYFPTQSDLIAATVDASLGPILTWRSDSPETRDRMEQLLAFAYPQMFRHEGALRAALYVSLQQWAQDRSASAKSQINDEKKLVRGHRKAILANVTEPLKAHVDQETLDKVIRAFSLVYGSEVFLVMKDIWKMNDGEVIDITQWMAKAILNQAMADSRAQDELP

Flanking regions ( +/- flanking 50bp)

GTAAGATAGCCGCGCAAAATTCACAGAAAATTGTTAAAGGAAAATCAGTTATGGCCTGTACTGATGATGGGGCACCTTACTCCGGCACACGGAAGCGGACATTTAATCTGCTGGTTAATACCGCGCTGGCACTGTTTGAACAGGGCGCGATGCCGTCAGTCTCTGAACTGGCGGCGGAAGCCGGTGTGTCACGGGCTACGGCTTACCGCTATTTTCCGACACAAAGTGATTTAATCGCCGCCACCGTGGATGCGAGCCTCGGCCCGATTCTGACCTGGCGCTCCGACAGCCCGGAAACCCGCGACCGCATGGAGCAATTACTGGCTTTCGCTTATCCGCAGATGTTCCGCCACGAAGGCGCACTGCGTGCGGCACTGTATGTGTCGTTGCAGCAGTGGGCGCAGGATCGCTCGGCCTCGGCCAAATCACAGATTAATGATGAGAAAAAACTGGTCAGAGGGCACCGCAAGGCGATTCTGGCTAATGTCACCGAGCCGCTGAAGGCGCATGTCGATCAGGAAACACTGGATAAAGTGATCCGTGCATTTTCGCTGGTGTACGGCTCGGAAGTGTTCCTGGTGATGAAAGATATCTGGAAGATGAATGACGGCGAAGTCATCGATATTACCCAATGGATGGCAAAAGCCATTCTGAATCAGGCCATGGCGGACAGCCGGGCACAGGATGAACTGCCGTAACCACGGCTGTTCTCTTATCTTCCGTGCACCACACTGATTTCTGCCTCTGA