VFG049189


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG049189, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein ATP-dependent chaperone ClpB
VF ID VF0783
Category Effector delivery system
Protein ID WP_014226431
Vf_category_id VFC0086

Occurence in the database

VFG049189 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2052 FBDBKF_15370 81826 84399 1 clpB ATP-dependent chaperone ClpB Morganella morganii S1
1 group_2052 EHELCC_10875 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S2
2 group_2052 NLDBIP_11220 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S4
3 group_2052 LHKJJB_11080 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S3
4 group_2052 HKOGLL_09690 507 3080 -1 clpB ATP-dependent chaperone ClpB Morganella morganii S5
5 group_2052 F4V73_RS12085 553 3126 -1 clpB ATP-dependent chaperone ClpB Morganella psychrotolerans
6 group_2052 PMI_RS01920 449810 452386 1 clpB ATP-dependent chaperone ClpB Proteus mirabilis HI4320