Orthogroup:group_1152


Homologs in group_1152

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06600 FBDBKF_06600 Morganella morganii S1 radA DNA repair protein RadA
EHELCC_09645 EHELCC_09645 Morganella morganii S2 radA DNA repair protein RadA
NLDBIP_10025 NLDBIP_10025 Morganella morganii S4 radA DNA repair protein RadA
LHKJJB_07730 LHKJJB_07730 Morganella morganii S3 radA DNA repair protein RadA
HKOGLL_07280 HKOGLL_07280 Morganella morganii S5 radA DNA repair protein RadA
F4V73_RS15345 F4V73_RS15345 Morganella psychrotolerans radA DNA repair protein RadA
PMI_RS12385 PMI_RS12385 Proteus mirabilis HI4320 radA DNA repair protein RadA

Distribution of group_1152 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1152 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1152

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1152.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 radA 7

Product

# Product Occurence
1 DNA repair protein RadA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1066 7 L Replication, recombination and repair (L) DNA repair protein RadA/Sms, contains AAA+ ATPase domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04485 7 DNA repair protein RadA/Sms - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13481 7 AAA domain
PF13541 7 Subunit ChlI of Mg-chelatase
PF18073 7 Rubredoxin metal binding domain

Annotations of the 83 SwissProt hits

Annotation Number of occurrences
Archaeal Lon protease 5
Circadian clock protein KaiC2 1
DNA repair and recombination protein RadB 7
DNA repair protein RAD51 1
DNA repair protein RAD51 homolog 1
DNA repair protein RAD51 homolog B 1
DNA repair protein Rad51 homolog 1
DNA repair protein RadA 34
DNA repair protein rhp51 1
Lon protease 18
Lon protease 2 4
Lon protease homolog 2, peroxisomal 6
Lon protease homolog, mitochondrial 2
Protein RecA 1

Protein length

Min length 462
Max length 463
Mean length (sd) 462.3 (0.5)
Median length 462.0

Protein length distribution