Orthogroup:group_1111


Homologs in group_1111

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06335 FBDBKF_06335 Morganella morganii S1 ygiB DUF1190 domain-containing protein
EHELCC_09380 EHELCC_09380 Morganella morganii S2 ygiB DUF1190 domain-containing protein
NLDBIP_09760 NLDBIP_09760 Morganella morganii S4 ygiB DUF1190 domain-containing protein
LHKJJB_07995 LHKJJB_07995 Morganella morganii S3 ygiB DUF1190 domain-containing protein
HKOGLL_07545 HKOGLL_07545 Morganella morganii S5 ygiB DUF1190 domain-containing protein
F4V73_RS15585 F4V73_RS15585 Morganella psychrotolerans - DUF1190 family protein
PMI_RS11625 PMI_RS11625 Proteus mirabilis HI4320 - DUF1190 family protein

Distribution of group_1111 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1111 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1111

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1111.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ygiB 5
2 - 2

Product

# Product Occurence
1 DUF1190 domain-containing protein 5
2 DUF1190 family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG5463 7 S Function unknown (S) Uncharacterized conserved protein YgiB, UPF0441/DUF1190 family, involved in bioifilm formation

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06693 7 Protein of unknown function (DUF1190)

Annotations of the 49 SwissProt hits

Annotation Number of occurrences
UPF0441 protein CKO_04429 1
UPF0441 protein ECA0329 1
UPF0441 protein ETA_04310 1
UPF0441 protein KPK_0672 1
UPF0441 protein KPN78578_33850 1
UPF0441 protein PC1_0312 1
UPF0441 protein SG0265 1
UPF0441 protein Spro_4274 1
UPF0441 protein YE3666 1
UPF0441 protein YPA_3130 1
UPF0441 protein YPN_0520 1
UPF0441 protein YPO0661/y3517/YP_2976 1
UPF0441 protein YPTB3401 1
UPF0441 protein YgiB 35
UPF0441 protein plu3956 1

Protein length

Min length 225
Max length 242
Mean length (sd) 227.7 (6.3)
Median length 225.0

Protein length distribution