Homologs in group_1044

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05905 FBDBKF_05905 60.0 Morganella morganii S1 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
EHELCC_08950 EHELCC_08950 60.0 Morganella morganii S2 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
NLDBIP_09330 NLDBIP_09330 60.0 Morganella morganii S4 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
LHKJJB_08425 LHKJJB_08425 60.0 Morganella morganii S3 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
HKOGLL_07975 HKOGLL_07975 60.0 Morganella morganii S5 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
F4V73_RS15990 F4V73_RS15990 60.4 Morganella psychrotolerans tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO

Distribution of the homologs in the orthogroup group_1044

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1044

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P28634 2.45e-109 317 62 0 235 1 trmO tRNA (adenine(37)-N6)-methyltransferase Escherichia coli (strain K12)
P44740 9.47e-85 254 51 1 234 1 trmO tRNA (adenine(37)-N6)-methyltransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9RPT0 1e-58 188 46 5 223 1 rcsF Putative S-adenosylmethionine-dependent methyltransferase RcsF Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O68638 4.01e-49 164 48 2 170 3 rcsF Putative S-adenosylmethionine-dependent methyltransferase RcsF Pseudomonas aeruginosa
P37752 2.64e-46 154 44 5 180 3 trmO tRNA (adenine(37)-N6)-methyltransferase (Fragment) Eikenella corrodens
Q4V7E0 3.31e-28 114 42 4 133 2 Trmo tRNA (adenine(37)-N6)-methyltransferase Rattus norvegicus
Q562D6 3.82e-28 113 42 4 133 2 Trmo tRNA (adenine(37)-N6)-methyltransferase Mus musculus
Q9BU70 1.74e-26 109 35 5 182 1 TRMO tRNA (adenine(37)-N6)-methyltransferase Homo sapiens
Q9V0X6 2.66e-20 87 35 4 151 3 PYRAB06630 Probable S-adenosyl-L-methionine-binding protein PYRAB06630 Pyrococcus abyssi (strain GE5 / Orsay)
O27825 3.58e-17 78 34 3 142 3 MTH_1797 Probable S-adenosyl-L-methionine-binding protein MTH_1797 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O29816 2.76e-16 80 31 6 182 3 AF_0433 Probable S-adenosyl-L-methionine-binding protein AF_0433 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O29998 2.49e-15 73 34 5 137 1 AF_0241 S-adenosyl-L-methionine-binding protein AF_0241 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O52278 6.95e-10 59 29 6 145 3 virR Probable S-adenosyl-L-methionine-binding protein VirR Rhizobium radiobacter
Q6NDF6 8.86e-07 50 26 6 141 1 RPA0152 S-adenosyl-L-methionine-binding protein RPA0152 Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009)
Q58978 1.6e-06 49 31 3 112 3 MJ1583 Probable S-adenosyl-L-methionine-binding protein MJ1583 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS11175
Feature type CDS
Gene tsaA
Product tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
Location 2458340 - 2459047 (strand: 1)
Length 708 (nucleotides) / 235 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1044
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01980 tRNA-methyltransferase O
PF18389 TrmO C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1720 Translation, ribosomal structure and biogenesis (J) J tRNA (Thr-GGU) A37 N6-methylase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22900 tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] - -

Protein Sequence

MNSYQITSIGHIISPYKEKFAVPRQPGLVQDGVGQLILHTPYNHPDAVRGLEQFSHLWLLFIFHQTAQQGWHPLVRPPRLGGNSKLGVFATRSTFRPNAIGMSLVELKDIIIEKQSVILQLGSLDLIDGTPIIDIKPYLPYAESIADATAGFAQYAPHEEMEILFSEDATQQLQYYSHQYPHLMRFITQVLQQDPRPAYKKSEQSDRVYAVHLLDFNIRWQVNGQQTLVLSIEPR

Flanking regions ( +/- flanking 50bp)

GGTTGCTATCAATCGGCAATCTGTGAAGGTTCAGCACTATTAATTACTCAATGAATAGCTACCAAATAACATCTATAGGGCATATTATCAGCCCTTATAAAGAGAAATTTGCCGTTCCTCGCCAACCTGGATTAGTCCAGGATGGCGTAGGCCAGCTAATACTACACACACCTTATAATCATCCTGATGCAGTAAGAGGCTTAGAACAATTTAGCCATCTTTGGTTATTATTTATTTTTCATCAAACAGCGCAACAAGGTTGGCATCCATTAGTGCGCCCGCCAAGATTAGGGGGGAATAGCAAACTCGGGGTTTTCGCCACTCGCTCAACTTTTCGCCCTAATGCTATCGGCATGTCATTAGTCGAGCTAAAAGATATCATTATTGAAAAGCAATCGGTGATTTTGCAACTAGGCAGTCTAGATCTTATTGATGGGACCCCCATTATTGATATCAAGCCGTACCTTCCCTATGCTGAGTCTATTGCGGATGCAACAGCAGGCTTTGCCCAATATGCTCCTCATGAAGAGATGGAGATTCTTTTTTCTGAAGATGCCACACAGCAGTTACAATATTACTCTCATCAATATCCTCATCTTATGCGATTTATCACTCAAGTATTGCAACAAGATCCGCGTCCTGCTTATAAAAAAAGCGAACAAAGTGATAGAGTATATGCCGTGCATTTACTGGATTTTAATATTCGTTGGCAAGTCAATGGGCAGCAAACACTTGTTCTTAGTATAGAACCGCGCTAACTTGCACTTACTAACATTGAAACTTCTTGTCTTTAAGCAAATCAGATTGA