Orthogroup:group_1069


Homologs in group_1069

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06055 FBDBKF_06055 Morganella morganii S1 yqcC DUF446 domain-containing protein
EHELCC_09100 EHELCC_09100 Morganella morganii S2 yqcC DUF446 domain-containing protein
NLDBIP_09480 NLDBIP_09480 Morganella morganii S4 yqcC DUF446 domain-containing protein
LHKJJB_08275 LHKJJB_08275 Morganella morganii S3 yqcC DUF446 domain-containing protein
HKOGLL_07825 HKOGLL_07825 Morganella morganii S5 yqcC DUF446 domain-containing protein
F4V73_RS15850 F4V73_RS15850 Morganella psychrotolerans - YqcC family protein
PMI_RS11330 PMI_RS11330 Proteus mirabilis HI4320 - YqcC family protein

Distribution of group_1069 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1069 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1069

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1069.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yqcC 5
2 - 2

Product

# Product Occurence
1 DUF446 domain-containing protein 5
2 YqcC family protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3098 7 S Function unknown (S) Uncharacterized conserved protein YqcC, DUF446 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04287 7 tRNA pseudouridine synthase C

Annotations of the 3 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein HI_1436 1
Uncharacterized protein YqcC 1
tRNA pseudouridine synthase C 1

Protein length

Unique protein length 107

Protein length distribution