Orthogroup:group_1050



Homologs in group_1050

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05945 FBDBKF_05945 Morganella morganii S1 lpxB lipid-A-disaccharide synthase
EHELCC_08990 EHELCC_08990 Morganella morganii S2 lpxB lipid-A-disaccharide synthase
NLDBIP_09370 NLDBIP_09370 Morganella morganii S4 lpxB lipid-A-disaccharide synthase
LHKJJB_08385 LHKJJB_08385 Morganella morganii S3 lpxB lipid-A-disaccharide synthase
HKOGLL_07935 HKOGLL_07935 Morganella morganii S5 lpxB lipid-A-disaccharide synthase
F4V73_RS15950 F4V73_RS15950 Morganella psychrotolerans lpxB lipid-A-disaccharide synthase
PMI_RS11220 PMI_RS11220 Proteus mirabilis HI4320 lpxB lipid-A-disaccharide synthase

Distribution of group_1050 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1050 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1050

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1050.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lpxB 7

Product

# Product Occurence
1 lipid-A-disaccharide synthase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0763 7 M Cell wall/membrane/envelope biogenesis (M) Lipid A disaccharide synthetase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02684 7 Lipid-A-disaccharide synthetase

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG013386 7 lipid-A-disaccharide synthase VF0044 Immune modulation

Annotations of the 258 SwissProt hits

Annotation Number of occurrences
Lipid-A-disaccharide synthase 250
Lipid-A-disaccharide synthase (Fragment) 1
Lipid-A-disaccharide synthase 1 3
Lipid-A-disaccharide synthase 2 3
Probable lipid-A-disaccharide synthase, mitochondrial 1

Protein length

Min length 384
Max length 390
Mean length (sd) 384.9 (2.3)
Median length 384.0

Protein length distribution