Orthogroup:group_1043


Homologs in group_1043

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05900 FBDBKF_05900 Morganella morganii S1 rcsF Rcs stress response system protein RcsF
EHELCC_08945 EHELCC_08945 Morganella morganii S2 rcsF Rcs stress response system protein RcsF
NLDBIP_09325 NLDBIP_09325 Morganella morganii S4 rcsF Rcs stress response system protein RcsF
LHKJJB_08430 LHKJJB_08430 Morganella morganii S3 rcsF Rcs stress response system protein RcsF
HKOGLL_07980 HKOGLL_07980 Morganella morganii S5 rcsF Rcs stress response system protein RcsF
F4V73_RS15995 F4V73_RS15995 Morganella psychrotolerans rcsF Rcs stress response system protein RcsF
PMI_RS11170 PMI_RS11170 Proteus mirabilis HI4320 rcsF Rcs stress response system protein RcsF

Distribution of group_1043 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1043 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1043

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1043.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rcsF 7

Product

# Product Occurence
1 Rcs stress response system protein RcsF 7

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06080 7 RcsF protein Two-component system -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF16358 7 RcsF lipoprotein

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Outer membrane lipoprotein RcsF 2

Protein length

Min length 134
Max length 136
Mean length (sd) 135.7 (0.8)
Median length 136.0

Protein length distribution