K03169
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Kegg Ortholog K03169
Protein list: lists the 14 occurences of the Kegg Ortholog within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Kegg Ortholog of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Ortholog has been clustered.
Orthogroups are shown in red if they are annotated with that particular Kegg Ortholog in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Kegg Ortholog prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Ortholog.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Ortholog prediction.
Description
External link |
K03169 |
KO |
K03169 |
Description |
DNA topoisomerase III [EC:5.6.2.1] |
KO part of 0 pathways
KO part of 0 modules
Occurence in the database
K03169 is associated with 14 different
proteins
|
The 14 proteins are classified into 2 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_2464 |
FBDBKF_19750 |
13364 |
15418 |
1 |
topB |
DNA topoisomerase I, ssDNA-binding Zn-finger and Zn-ribbon domains |
Morganella morganii S1 |
1 |
group_2464 |
EHELCC_10845 |
207133 |
209187 |
1 |
topB |
DNA topoisomerase I, ssDNA-binding Zn-finger and Zn-ribbon domains |
Morganella morganii S2 |
2 |
group_2464 |
NLDBIP_11190 |
185404 |
187458 |
1 |
topB |
DNA topoisomerase I, ssDNA-binding Zn-finger and Zn-ribbon domains |
Morganella morganii S4 |
3 |
group_2464 |
LHKJJB_10165 |
4070 |
6124 |
-1 |
topB |
DNA topoisomerase I, ssDNA-binding Zn-finger and Zn-ribbon domains |
Morganella morganii S3 |
4 |
group_2464 |
HKOGLL_16330 |
4079 |
6133 |
-1 |
topB |
DNA topoisomerase I, ssDNA-binding Zn-finger and Zn-ribbon domains |
Morganella morganii S5 |
5 |
group_2464 |
PMI_RS12960 |
2874365 |
2876419 |
-1 |
|
DNA topoisomerase III |
Proteus mirabilis HI4320 |
6 |
group_1043 |
FBDBKF_05395 |
87191 |
89155 |
-1 |
topB |
DNA topoisomerase IA |
Morganella morganii S1 |
7 |
group_1043 |
EHELCC_12195 |
92339 |
94303 |
1 |
topB |
DNA topoisomerase IA |
Morganella morganii S2 |
8 |
group_1043 |
NLDBIP_12535 |
92294 |
94258 |
1 |
topB |
DNA topoisomerase IA |
Morganella morganii S4 |
9 |
group_1043 |
LHKJJB_12395 |
92339 |
94303 |
1 |
topB |
DNA topoisomerase IA |
Morganella morganii S3 |
10 |
group_1043 |
HKOGLL_11010 |
92339 |
94303 |
1 |
topB |
DNA topoisomerase IA |
Morganella morganii S5 |
11 |
group_1043 |
F4V73_RS03900 |
825693 |
827609 |
1 |
|
DNA topoisomerase III |
Morganella psychrotolerans |
12 |
group_1043 |
PMI_RS07250 |
1586782 |
1588749 |
-1 |
|
DNA topoisomerase III |
Proteus mirabilis HI4320 |
13 |
group_2464 |
PMI_RS18625 |
18144 |
20462 |
1 |
topB |
type IA DNA topoisomerase |
Proteus mirabilis HI4320 |