Orthogroup:group_1015


Homologs in group_1015

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05670 FBDBKF_05670 Morganella morganii S1 pdxH pyridoxamine 5'-phosphate oxidase
EHELCC_11920 EHELCC_11920 Morganella morganii S2 pdxH pyridoxamine 5'-phosphate oxidase
NLDBIP_12260 NLDBIP_12260 Morganella morganii S4 pdxH pyridoxamine 5'-phosphate oxidase
LHKJJB_12120 LHKJJB_12120 Morganella morganii S3 pdxH pyridoxamine 5'-phosphate oxidase
HKOGLL_10735 HKOGLL_10735 Morganella morganii S5 pdxH pyridoxamine 5'-phosphate oxidase
F4V73_RS03635 F4V73_RS03635 Morganella psychrotolerans pdxH pyridoxamine 5'-phosphate oxidase
PMI_RS06700 PMI_RS06700 Proteus mirabilis HI4320 pdxH pyridoxamine 5'-phosphate oxidase

Distribution of group_1015 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1015 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1015

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1015.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pdxH 7

Product

# Product Occurence
1 pyridoxamine 5'-phosphate oxidase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0259 7 H Coenzyme transport and metabolism (H) Pyridoxine/pyridoxamine 5'-phosphate oxidase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01243 7 Pyridoxamine 5'-phosphate oxidase
PF10590 7 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

Annotations of the 361 SwissProt hits

Annotation Number of occurrences
Dihydrophenazinedicarboxylate synthase 3
Probable pyridoxamine 5'-phosphate oxidase 1
Putative pyridoxamine 5'-phosphate oxidase 1
Pyridoxamine 5'-phosphate oxidase 1
Pyridoxine 5'-phosphate oxidase 1
Pyridoxine-5'-phosphate oxidase 5
Pyridoxine/pyridoxamine 5'-phosphate oxidase 344
Pyridoxine/pyridoxamine 5'-phosphate oxidase 1 2
Pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic 1
Pyridoxine/pyridoxamine 5'-phosphate oxidase 2 2

Protein length

Min length 216
Max length 217
Mean length (sd) 216.1 (0.4)
Median length 216.0

Protein length distribution