COG0134


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0134, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Indole-3-glycerol phosphate synthase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0134 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_947 FBDBKF_05170 41564 42931 1 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF Morganella morganii S1
1 group_947 EHELCC_12420 138563 139930 -1 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF Morganella morganii S2
2 group_947 NLDBIP_12760 138518 139885 -1 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF Morganella morganii S4
3 group_947 LHKJJB_12620 138563 139930 -1 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF Morganella morganii S3
4 group_947 HKOGLL_11235 138563 139930 -1 trpF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF Morganella morganii S5
5 group_947 F4V73_RS05625 1196799 1198166 1 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF Morganella psychrotolerans
6 group_947 PMI_RS06495 1424761 1426134 1 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF Proteus mirabilis HI4320