Orthogroup:group_1006


Homologs in group_1006

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05100 FBDBKF_05100 Morganella morganii S1 acnA aconitate hydratase AcnA
EHELCC_12490 EHELCC_12490 Morganella morganii S2 acnA aconitate hydratase AcnA
NLDBIP_12830 NLDBIP_12830 Morganella morganii S4 acnA aconitate hydratase AcnA
LHKJJB_12690 LHKJJB_12690 Morganella morganii S3 acnA aconitate hydratase AcnA
HKOGLL_11305 HKOGLL_11305 Morganella morganii S5 acnA aconitate hydratase AcnA
F4V73_RS05555 F4V73_RS05555 Morganella psychrotolerans acnA aconitate hydratase AcnA
PMI_RS06370 PMI_RS06370 Proteus mirabilis HI4320 acnA aconitate hydratase AcnA

Distribution of group_1006 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1006 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1006

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1006.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acnA 7

Product

# Product Occurence
1 aconitate hydratase AcnA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1048 7 C Energy production and conversion (C) Aconitase A

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00330 7 Aconitase family (aconitate hydratase)
PF00694 7 Aconitase C-terminal domain

Annotations of the 562 SwissProt hits

Annotation Number of occurrences
2,3-dimethylmalate dehydratase large subunit 1
2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) 1
3-isopropylmalate dehydratase 9
3-isopropylmalate dehydratase large subunit 426
3-isopropylmalate dehydratase large subunit (Fragment) 9
3-isopropylmalate dehydratase large subunit 1 10
3-isopropylmalate dehydratase large subunit 2 6
3-isopropylmalate dehydratase large subunit gloJ 1
Aconitase htyD 1
Aconitase-ribosomal protein bL21m fusion protein 1
Aconitate hydratase (Fragment) 1
Aconitate hydratase 1 1
Aconitate hydratase 2, mitochondrial 1
Aconitate hydratase 3, mitochondrial 1
Aconitate hydratase A 32
Aconitate hydratase, cytoplasmic 1
Aconitate hydratase, cytoplasmic (Fragment) 1
Aconitate hydratase, mitochondrial 12
Cytoplasmic aconitate hydratase 7
Homoaconitase large subunit 1
Homoaconitase, mitochondrial 19
Homocitrate dehydratase, mitochondrial 1
Iron-responsive element-binding protein 2 7
Isopropylmalate/citramalate isomerase large subunit 1
Methanogen homoaconitase large subunit 1
Phosphinomethylmalate isomerase 1
Probable 3-isopropylmalate dehydratase large subunit 2
Probable aconitate hydratase, mitochondrial 2
Probable cytoplasmic aconitate hydratase 1
Putative aconitate hydratase 1
Putative aconitate hydratase, cytoplasmic 1
Putative aconitate hydratase, mitochondrial 2

Protein length

Min length 888
Max length 890
Mean length (sd) 889.7 (0.8)
Median length 890.0

Protein length distribution