COG1048


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1048, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Aconitase A
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1048 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_939 FBDBKF_05100 24531 27203 -1 acnA aconitate hydratase AcnA Morganella morganii S1
1 group_939 EHELCC_12490 154291 156963 1 acnA aconitate hydratase AcnA Morganella morganii S2
2 group_939 NLDBIP_12830 154246 156918 1 acnA aconitate hydratase AcnA Morganella morganii S4
3 group_939 LHKJJB_12690 154291 156963 1 acnA aconitate hydratase AcnA Morganella morganii S3
4 group_939 HKOGLL_11305 154291 156963 1 acnA aconitate hydratase AcnA Morganella morganii S5
5 group_939 F4V73_RS05555 1179598 1182264 -1 acnA aconitate hydratase AcnA Morganella psychrotolerans
6 group_939 PMI_RS06370 1395199 1397871 -1 acnA aconitate hydratase AcnA Proteus mirabilis HI4320