Orthogroup:group_1002


Homologs in group_1002

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05600 FBDBKF_05600 Morganella morganii S1 pspC envelope stress response membrane protein PspC
EHELCC_11990 EHELCC_11990 Morganella morganii S2 pspC envelope stress response membrane protein PspC
NLDBIP_12330 NLDBIP_12330 Morganella morganii S4 pspC envelope stress response membrane protein PspC
LHKJJB_12190 LHKJJB_12190 Morganella morganii S3 pspC envelope stress response membrane protein PspC
HKOGLL_10805 HKOGLL_10805 Morganella morganii S5 pspC envelope stress response membrane protein PspC
F4V73_RS03705 F4V73_RS03705 Morganella psychrotolerans pspC envelope stress response membrane protein PspC
PMI_RS06635 PMI_RS06635 Proteus mirabilis HI4320 pspC envelope stress response membrane protein PspC

Distribution of group_1002 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1002 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1002

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1002.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 pspC 7

Product

# Product Occurence
1 envelope stress response membrane protein PspC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1983 7 KT Transcription (K)
Signal transduction mechanisms (T)		 Phage shock protein PspC (stress-responsive transcriptional regulator)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03973 7 phage shock protein C - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF04024 7 PspC domain

Annotations of the 4 SwissProt hits

Annotation Number of occurrences
Phage shock protein C 4

Protein length

Min length 117
Max length 118
Mean length (sd) 117.1 (0.4)
Median length 117.0

Protein length distribution