Homologs in group_745

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03315 FBDBKF_03315 80.5 Morganella morganii S1 tldD metalloprotease TldD
EHELCC_07220 EHELCC_07220 80.5 Morganella morganii S2 tldD metalloprotease TldD
NLDBIP_07545 NLDBIP_07545 80.5 Morganella morganii S4 tldD metalloprotease TldD
LHKJJB_07080 LHKJJB_07080 80.5 Morganella morganii S3 tldD metalloprotease TldD
HKOGLL_03850 HKOGLL_03850 80.5 Morganella morganii S5 tldD metalloprotease TldD
F4V73_RS11620 F4V73_RS11620 80.9 Morganella psychrotolerans tldD metalloprotease TldD

Distribution of the homologs in the orthogroup group_745

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_745

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AGH0 0.0 763 79 0 481 3 tldD Metalloprotease TldD homolog Shigella flexneri
P0AGG8 0.0 763 79 0 481 1 tldD Metalloprotease TldD Escherichia coli (strain K12)
P0AGG9 0.0 763 79 0 481 3 tldD Metalloprotease TldD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P45297 0.0 680 68 1 477 3 tldD Metalloprotease TldD homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57478 0.0 639 61 1 483 3 tldD Metalloprotease TldD homolog Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9F2 0.0 631 61 1 483 3 tldD Metalloprotease TldD homolog Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AE1 0.0 588 60 2 482 3 tldD Metalloprotease TldD homolog Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P74002 1.2e-68 230 33 7 460 3 slr1322 Metalloprotease slr1322 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q58403 1.7e-58 202 32 8 439 3 MJ0996 Metalloprotease MJ0996 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O26944 1.87e-53 189 29 9 466 3 MTH_856 Metalloprotease MTH_856 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O29602 2.51e-39 150 30 14 381 3 AF_0655 Metalloprotease AF_0655 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P73754 8.47e-39 149 27 10 477 3 slr0863 Metalloprotease slr0863 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q7LXP6 2.74e-37 145 27 12 440 1 tldD Zinc metalloprotease TldD homolog Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Q57684 1.68e-12 72 32 4 164 4 MJ0231 Uncharacterized protein MJ0231 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P0AFK0 4.46e-10 65 21 11 462 1 pmbA Metalloprotease PmbA Escherichia coli (strain K12)
P0AFK1 4.46e-10 65 21 11 462 3 pmbA Metalloprotease PmbA Escherichia coli O157:H7
Q8KA30 2.74e-07 56 23 5 208 3 pmbA Metalloprotease PmbA homolog Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57191 4.41e-06 52 21 3 187 3 pmbA Metalloprotease PmbA homolog Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P45077 8.79e-05 48 21 7 239 3 pmbA Metalloprotease PmbA homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18100
Feature type CDS
Gene tldD
Product metalloprotease TldD
Location 3977961 - 3979406 (strand: 1)
Length 1446 (nucleotides) / 481 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_745
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01523 PmbA/TldA metallopeptidase domain 1
PF19289 PmbA/TldA metallopeptidase C-terminal domain
PF19290 PmbA/TldA metallopeptidase central domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0312 General function prediction only (R) R Zn-dependent protease PmbA/TldA or its inactivated homolog

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03568 TldD protein - -

Protein Sequence

MSLAVVSESLLEANNLSLDDLASTLEQLAQRQIDYGDLYFQSSYHEAWILDDQIIKDGSYNIDQGVGVRAIYGEKTGFAYADQLTLNALNQSAHAARSIVQAQGNGQIHTLGAIQHTPLYNLNDPLQSLSREEKIALLHDVDRVARAEDKRVKQVNASLTGVYEHVLVAATDGTLAADVRPLVRLSVSVLVEDDGKRERGSSGGGGRFGYDYFLTKENGETHAATYAREAVRMALVNLSAIAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRQTSVFSGRIGDKVTSELCTIVDDGSIEGRRGSVAIDDEGVPGQYNVLIENGILKGYMQDKMNARLMGVKPTGNGRRESYAHLPMPRMTNTYMLAGKSSPEEIIASVDRGIYAPNFGGGQVDITSGKFVFSTSEAYLIEKGKITKPIKGATLIGSGIEAMQQVSMVGNDLALDKGVGVCGKEGQSLPVGVGQPTLKLDKLTVGGTA

Flanking regions ( +/- flanking 50bp)

CGCCCGAAACTGACACACTTAATAAAAAAAGTTAAGGATAAAAAAGAATTATGAGTTTAGCTGTTGTCAGCGAAAGTCTGTTGGAAGCGAACAACCTGAGTTTAGATGATTTAGCATCGACACTAGAGCAGCTTGCACAGCGTCAAATTGATTATGGTGATCTTTATTTTCAATCAAGCTACCACGAAGCATGGATATTAGATGATCAGATAATTAAAGATGGCTCTTACAATATTGACCAAGGGGTTGGCGTTAGAGCGATTTATGGTGAAAAAACAGGTTTTGCTTATGCAGACCAATTAACACTCAACGCACTTAACCAAAGTGCTCATGCTGCGCGTAGTATTGTGCAAGCACAAGGCAATGGGCAGATCCATACACTGGGTGCTATTCAACATACTCCGTTATACAACCTAAATGATCCATTACAAAGTTTGTCTCGTGAAGAAAAAATAGCACTATTACATGACGTTGATCGTGTGGCACGGGCTGAAGATAAACGTGTTAAACAAGTCAATGCCTCATTAACGGGAGTGTATGAGCATGTGCTAGTTGCTGCAACGGATGGTACTTTAGCGGCGGATGTGCGTCCTCTTGTACGTCTTTCAGTAAGCGTACTGGTCGAAGATGACGGTAAACGTGAACGTGGTTCGAGTGGTGGCGGTGGTCGTTTTGGTTATGATTATTTTCTGACTAAAGAAAATGGCGAAACCCATGCAGCGACTTATGCCCGTGAAGCGGTACGCATGGCATTAGTTAATTTATCGGCTATTGCTGCACCAGCAGGTACAATGCCTGTGGTTTTAGGCGCCGGATGGCCCGGTGTTTTATTACATGAAGCTGTTGGACATGGTTTAGAAGGTGATTTTAATCGTCGTCAAACATCGGTATTCTCTGGGCGTATTGGCGATAAGGTAACTTCTGAGTTATGTACTATCGTGGATGATGGTTCAATTGAAGGCCGACGAGGCTCCGTGGCGATTGATGATGAAGGCGTACCAGGCCAATACAACGTATTAATCGAAAATGGCATCTTAAAAGGCTATATGCAAGATAAGATGAATGCGCGTTTAATGGGGGTAAAACCGACGGGCAATGGGCGTCGTGAATCCTATGCACATTTGCCAATGCCACGTATGACCAACACCTATATGCTTGCGGGTAAATCTTCTCCTGAAGAGATCATCGCCAGTGTCGATCGCGGTATTTATGCGCCAAACTTTGGTGGTGGGCAAGTTGATATTACCTCCGGTAAGTTTGTTTTCTCAACTTCAGAAGCCTATTTAATTGAAAAGGGTAAAATTACTAAACCAATTAAAGGCGCAACCTTGATTGGTTCAGGTATTGAAGCGATGCAACAAGTTTCTATGGTGGGTAATGATCTCGCATTAGATAAAGGTGTCGGGGTGTGTGGCAAAGAGGGGCAAAGCTTACCAGTAGGGGTTGGGCAACCGACACTGAAATTGGATAAGTTAACCGTTGGTGGTACTGCTTAACAGTTGTTATTGTTATCTATTTATACAAATTACCCCAATAAAACTCCATC