Homologs in group_1474

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09500 FBDBKF_09500 55.0 Morganella morganii S1 narL two-component system response regulator NarL
EHELCC_09910 EHELCC_09910 55.0 Morganella morganii S2 narL two-component system response regulator NarL
NLDBIP_19230 NLDBIP_19230 55.0 Morganella morganii S4 narL two-component system response regulator NarL
LHKJJB_19140 LHKJJB_19140 55.0 Morganella morganii S3 narL two-component system response regulator NarL
HKOGLL_18920 HKOGLL_18920 55.0 Morganella morganii S5 narL two-component system response regulator NarL
F4V73_RS10470 F4V73_RS10470 54.2 Morganella psychrotolerans - glycerophosphoryl diester phosphodiesterase

Distribution of the homologs in the orthogroup group_1474

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1474

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P10908 2.66e-39 139 34 3 241 1 ugpQ Glycerophosphodiester phosphodiesterase, cytoplasmic Escherichia coli (strain K12)
O07592 1.28e-37 134 34 6 245 3 yhdW Putative glycerophosphodiester phosphodiesterase YhdW Bacillus subtilis (strain 168)
Q8RB32 1.23e-36 132 34 3 235 1 UgpQ Glycerophosphodiester phosphodiesterase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
A0A8F4N283 1.41e-32 121 35 6 240 1 bagdpd Glycerophosphodiester phosphodiesterase Bacillus altitudinis
P37965 2.37e-29 114 30 9 253 1 glpQ Glycerophosphodiester phosphodiesterase Bacillus subtilis (strain 168)
P54527 2.91e-27 107 31 3 234 4 yqiK Uncharacterized protein YqiK Bacillus subtilis (strain 168)
P47535 5.07e-17 80 34 2 164 4 MG293 Uncharacterized protein MG293 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
O14169 2.56e-16 79 27 7 238 3 SPAC4D7.02c Phosphatidylglycerol phospholipase C Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q3T0T0 8.98e-15 75 43 1 93 2 GDE1 Glycerophosphodiester phosphodiesterase 1 Bos taurus
Q9JL55 2.17e-14 74 41 1 93 1 Gde1 Glycerophosphodiester phosphodiesterase 1 Rattus norvegicus
Q9NZC3 2.46e-14 74 41 1 93 1 GDE1 Glycerophosphodiester phosphodiesterase 1 Homo sapiens
Q9JL56 2.82e-14 74 37 1 108 1 Gde1 Glycerophosphodiester phosphodiesterase 1 Mus musculus
P75367 5.45e-13 69 31 3 150 4 MPN_420 Uncharacterized protein MG293 homolog Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
F4I8H8 8.92e-13 70 25 3 236 2 GDPD4 Glycerophosphodiester phosphodiesterase GDPD4 Arabidopsis thaliana
P9WMU3 1.89e-11 65 40 0 79 1 glpQ1 Probable glycerophosphodiester phosphodiesterase 1 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMU2 1.89e-11 65 40 0 79 3 glpQ1 Probable glycerophosphodiester phosphodiesterase 1 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q6W3E5 2.13e-11 66 28 8 241 2 GDPD4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Homo sapiens
O07244 4.14e-10 61 24 6 246 1 glpQ2 Probable glycerophosphodiester phosphodiesterase 2 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q3KTM2 9.82e-10 61 42 2 85 1 GDPD5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Gallus gallus
Q9HCC8 1.08e-09 61 40 2 85 1 GDPD2 Glycerophosphoinositol inositolphosphodiesterase GDPD2 Homo sapiens
Q9ESM6 1.39e-09 61 38 2 85 1 Gdpd2 Glycerophosphoinositol inositolphosphodiesterase GDPD2 Mus musculus
Q95JR7 1.83e-09 60 27 8 238 2 GDPD4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Macaca fascicularis
Q8WTR4 4.94e-09 59 28 7 183 1 GDPD5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Homo sapiens
Q640M6 6.06e-08 56 27 6 183 1 Gdpd5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Mus musculus
P9WLF0 1.1e-07 55 28 3 148 3 MT2337 Uncharacterized protein MT2337 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WLF1 1.12e-07 55 28 3 148 1 Rv2277c Uncharacterized protein Rv2277c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q3TT99 1.9e-07 54 32 4 123 2 Gdpd4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Mus musculus
P47625 8.07e-07 52 25 3 162 4 MG385 Uncharacterized protein MG385 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q08959 1.41e-06 51 35 0 73 1 PGC1 Phosphatidylglycerol phospholipase C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A1D8PNZ7 3.07e-06 51 45 2 59 1 GDE1 Glycerophosphocholine phosphodiesterase GDE1 Candida albicans (strain SC5314 / ATCC MYA-2876)
Q8N9F7 6.1e-06 49 29 6 134 1 GDPD1 Lysophospholipase D GDPD1 Homo sapiens
Q9C104 6.27e-06 50 40 1 61 1 gde1 Glycerophosphocholine phosphodiesterase gde1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q02979 9.63e-06 49 41 1 55 1 GDE1 Glycerophosphocholine phosphodiesterase GDE1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9CRY7 1.23e-05 48 23 12 271 1 Gdpd1 Lysophospholipase D GDPD1 Mus musculus
P09394 1.77e-05 48 41 0 55 1 glpQ Glycerophosphodiester phosphodiesterase, periplasmic Escherichia coli (strain K12)
Q9C907 2.21e-05 48 43 0 53 2 GDPD5 Glycerophosphodiester phosphodiesterase GDPD5 Arabidopsis thaliana
Q0VGK4 4.37e-05 47 30 6 131 2 Gdpd1 Lysophospholipase D GDPD1 Rattus norvegicus
P75212 0.00018 45 26 2 145 4 MPN_566 Uncharacterized protein MG385 homolog Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q99LY2 0.000183 45 42 0 54 1 Gdpd3 Lysophospholipase D GDPD3 Mus musculus
Q680A6 0.000535 44 26 17 267 2 GDPD3 Glycerophosphodiester phosphodiesterase GDPD3 Arabidopsis thaliana
Q9SD81 0.000562 43 39 0 53 2 GDPD6 Glycerophosphodiester phosphodiesterase GDPD6 Arabidopsis thaliana

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18005
Feature type CDS
Gene -
Product glycerophosphoryl diester phosphodiesterase
Location 3956051 - 3956767 (strand: 1)
Length 717 (nucleotides) / 238 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1474
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03009 Glycerophosphoryl diester phosphodiesterase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0584 Lipid transport and metabolism (I) I Glycerophosphoryl diester phosphodiesterase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Glycerophospholipid metabolism -

Protein Sequence

MKIAAHRGFSGKAPENTLAAFKMAIDFGCEWIETDVQLTADHVPVLIHDKTVNRCTNGQGAVRFHSLDDLHRLDAGSWFSSLYQGEKIPTLRQGLQLIKRSGTKLNIELKTWPDDDVERLCLAVSEMIKSADIPNEQILFSSFDTHALMVMKRYLPAIRRGQLWDDIPDNALETLQAIEGFSVHCNYQYLTQQQAAMLKQAGYEIYCYTPNDPKEVKDFEAWGVDMLITDVPDIYQQN

Flanking regions ( +/- flanking 50bp)

TGTCATAAATGGTTGTCATGATGGCGATATCAACGAATAAGGAGAGAAAGATGAAAATAGCCGCTCATAGAGGATTTTCTGGAAAGGCACCTGAAAACACATTAGCTGCATTTAAAATGGCAATTGATTTTGGGTGTGAATGGATTGAAACCGATGTGCAATTAACGGCAGATCATGTACCTGTACTGATCCATGACAAGACGGTTAATCGTTGCACGAATGGACAAGGTGCGGTGCGCTTTCATAGTTTGGATGATTTACACCGTCTTGATGCAGGCAGTTGGTTTAGTTCACTTTATCAAGGGGAAAAAATTCCCACACTAAGACAAGGTTTGCAGTTGATAAAGCGCTCAGGCACTAAGCTCAATATCGAACTTAAAACATGGCCTGATGATGATGTAGAGCGCTTATGTTTAGCGGTATCTGAAATGATAAAAAGCGCAGATATCCCTAACGAACAAATCCTGTTTTCCTCTTTCGATACTCATGCATTAATGGTGATGAAACGTTATCTGCCCGCCATTCGTCGAGGACAGCTATGGGATGATATTCCTGATAATGCACTAGAAACTTTACAAGCTATAGAGGGGTTTAGCGTGCATTGTAATTATCAATATTTAACGCAGCAACAAGCGGCTATGTTGAAACAAGCAGGCTATGAAATTTATTGCTATACCCCCAATGATCCTAAAGAAGTGAAAGATTTTGAAGCATGGGGAGTCGATATGTTGATCACTGATGTCCCAGATATTTATCAACAGAATTAATGTGCTTTTTATAAGGTATCTGAGTGAATGACACAGATGCCTTATAATGC