Homologs in group_1474

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09500 FBDBKF_09500 100.0 Morganella morganii S1 narL two-component system response regulator NarL
EHELCC_09910 EHELCC_09910 100.0 Morganella morganii S2 narL two-component system response regulator NarL
LHKJJB_19140 LHKJJB_19140 100.0 Morganella morganii S3 narL two-component system response regulator NarL
HKOGLL_18920 HKOGLL_18920 100.0 Morganella morganii S5 narL two-component system response regulator NarL
F4V73_RS10470 F4V73_RS10470 84.9 Morganella psychrotolerans - glycerophosphoryl diester phosphodiesterase
PMI_RS18005 PMI_RS18005 55.0 Proteus mirabilis HI4320 - glycerophosphoryl diester phosphodiesterase

Distribution of the homologs in the orthogroup group_1474

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1474

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8RB32 1e-44 153 36 2 234 1 UgpQ Glycerophosphodiester phosphodiesterase Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
P10908 2.9e-31 118 32 2 231 1 ugpQ Glycerophosphodiester phosphodiesterase, cytoplasmic Escherichia coli (strain K12)
O07592 1.2e-30 117 33 5 240 3 yhdW Putative glycerophosphodiester phosphodiesterase YhdW Bacillus subtilis (strain 168)
P54527 1.08e-28 111 32 3 236 4 yqiK Uncharacterized protein YqiK Bacillus subtilis (strain 168)
A0A8F4N283 4.34e-28 110 35 5 238 1 bagdpd Glycerophosphodiester phosphodiesterase Bacillus altitudinis
P37965 4.76e-27 108 30 7 255 1 glpQ Glycerophosphodiester phosphodiesterase Bacillus subtilis (strain 168)
Q3T0T0 2.36e-19 88 38 1 121 2 GDE1 Glycerophosphodiester phosphodiesterase 1 Bos taurus
Q9NZC3 2.48e-19 88 38 1 121 1 GDE1 Glycerophosphodiester phosphodiesterase 1 Homo sapiens
Q9JL56 3.22e-19 88 42 1 108 1 Gde1 Glycerophosphodiester phosphodiesterase 1 Mus musculus
Q9JL55 6e-19 87 55 0 70 1 Gde1 Glycerophosphodiester phosphodiesterase 1 Rattus norvegicus
O07244 4.62e-15 75 29 9 255 1 glpQ2 Probable glycerophosphodiester phosphodiesterase 2 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q9ESM6 7.18e-13 70 44 1 84 1 Gdpd2 Glycerophosphoinositol inositolphosphodiesterase GDPD2 Mus musculus
Q9HCC8 1.13e-12 70 42 1 87 1 GDPD2 Glycerophosphoinositol inositolphosphodiesterase GDPD2 Homo sapiens
P9WMU3 6.42e-12 67 42 0 77 1 glpQ1 Probable glycerophosphodiester phosphodiesterase 1 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMU2 6.42e-12 67 42 0 77 3 glpQ1 Probable glycerophosphodiester phosphodiesterase 1 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
O14169 2.13e-11 65 24 5 243 3 SPAC4D7.02c Phosphatidylglycerol phospholipase C Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q6W3E5 4.55e-11 65 37 3 125 2 GDPD4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Homo sapiens
P75367 6.78e-11 63 26 4 193 4 MPN_420 Uncharacterized protein MG293 homolog Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P47535 2.36e-10 62 29 2 169 4 MG293 Uncharacterized protein MG293 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q3TT99 2.98e-10 63 25 8 270 2 Gdpd4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Mus musculus
Q95JR7 6.43e-10 62 35 2 122 2 GDPD4 Glycerophosphodiester phosphodiesterase domain-containing protein 4 Macaca fascicularis
Q3KTM2 1.26e-09 61 33 5 131 1 GDPD5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Gallus gallus
Q8WTR4 1.18e-08 58 38 1 84 1 GDPD5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Homo sapiens
F4I8H8 3.58e-08 56 23 5 244 2 GDPD4 Glycerophosphodiester phosphodiesterase GDPD4 Arabidopsis thaliana
Q08959 4.72e-08 56 39 0 71 1 PGC1 Phosphatidylglycerol phospholipase C Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q640M6 5.98e-08 56 38 1 84 1 Gdpd5 Glycerophosphodiester phosphodiesterase domain-containing protein 5 Mus musculus
Q8N9F7 1.22e-07 55 22 8 276 1 GDPD1 Lysophospholipase D GDPD1 Homo sapiens
P9WLF1 1.69e-07 54 31 4 151 1 Rv2277c Uncharacterized protein Rv2277c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WLF0 1.86e-07 54 31 4 151 3 MT2337 Uncharacterized protein MT2337 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q8C0L9 8.77e-07 52 24 10 274 1 Gpcpd1 Glycerophosphocholine phosphodiesterase GPCPD1 Mus musculus
Q9C104 1.87e-06 52 36 2 76 1 gde1 Glycerophosphocholine phosphodiesterase gde1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9CRY7 2.6e-06 51 29 2 115 1 Gdpd1 Lysophospholipase D GDPD1 Mus musculus
Q0VGK4 4.83e-06 50 29 2 115 2 Gdpd1 Lysophospholipase D GDPD1 Rattus norvegicus
Q80VJ4 5.09e-06 50 23 7 274 1 Gpcpd1 Glycerophosphocholine phosphodiesterase GPCPD1 Rattus norvegicus
Q9C907 8.53e-06 49 47 0 53 2 GDPD5 Glycerophosphodiester phosphodiesterase GDPD5 Arabidopsis thaliana
Q9NPB8 1.67e-05 48 23 8 289 1 GPCPD1 Glycerophosphocholine phosphodiesterase GPCPD1 Homo sapiens
Q9SD81 2.02e-05 48 33 4 112 2 GDPD6 Glycerophosphodiester phosphodiesterase GDPD6 Arabidopsis thaliana
Q9FLM1 2.81e-05 48 32 2 82 2 GDPD2 Glycerophosphodiester phosphodiesterase GDPD2 Arabidopsis thaliana
P47625 2.86e-05 47 23 6 159 4 MG385 Uncharacterized protein MG385 Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P75212 3.61e-05 47 25 4 163 4 MPN_566 Uncharacterized protein MG385 homolog Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q680A6 3.78e-05 47 24 8 194 2 GDPD3 Glycerophosphodiester phosphodiesterase GDPD3 Arabidopsis thaliana
Q02979 6.08e-05 47 40 1 60 1 GDE1 Glycerophosphocholine phosphodiesterase GDE1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9SGA2 6.28e-05 47 24 7 181 1 GDPD1 Glycerophosphodiester phosphodiesterase GDPD1, chloroplastic Arabidopsis thaliana
Q99LY2 0.000436 44 36 0 68 1 Gdpd3 Lysophospholipase D GDPD3 Mus musculus

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19230
Feature type CDS
Gene narL
Product two-component system response regulator NarL
Location 2933 - 3670 (strand: 1)
Length 738 (nucleotides) / 245 (amino acids)

Contig

Accession ZDB_546
Length 22068 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1474
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03009 Glycerophosphoryl diester phosphodiesterase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0584 Lipid transport and metabolism (I) I Glycerophosphoryl diester phosphodiesterase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Glycerophospholipid metabolism -

Protein Sequence

MIIAAHRGFAARAPENTMAAFRQAAEFGCLWIETDVQLSADGVPVLIHDETVNRTTNGSGKVTDLTLRELRALDAGLWAGEVYRGEKIPLLTDLLVLAEESGLHLNLELKTELTDSDHAIARLCEATAAVLEMQNFPAERILFSGFDTRTLRHMHKRMPHIRRGQLWEKIPPQPLALLQEIDAFSVHCDWLFLREETAKSLRKAGYQIFCYTPNYPELVAHYADWGVGMLITDNPAIYRDENRFS

Flanking regions ( +/- flanking 50bp)

GCAGAACAAATAGTACCGGTATCCGGCCTCTCTGTATAAAGGAACAGATTATGATTATTGCAGCACACCGCGGCTTTGCCGCCCGTGCACCGGAAAACACGATGGCGGCATTCCGGCAGGCTGCGGAGTTTGGCTGTCTGTGGATTGAAACCGATGTTCAGCTCAGCGCTGACGGCGTGCCGGTGCTGATCCACGATGAAACTGTGAACCGCACCACCAACGGCAGCGGGAAAGTGACGGATCTGACCTTACGCGAACTGCGGGCACTGGATGCCGGGTTATGGGCGGGGGAGGTATACCGGGGGGAAAAAATTCCGCTGCTGACCGACCTGCTGGTGCTGGCGGAAGAATCCGGATTGCATCTGAACCTGGAACTGAAAACCGAGCTGACAGACAGCGACCACGCAATTGCCCGGTTGTGTGAAGCCACCGCAGCAGTACTTGAAATGCAGAATTTCCCGGCAGAGCGGATTCTGTTTTCCGGCTTTGATACCCGCACACTGCGCCATATGCACAAACGGATGCCGCACATCCGGCGCGGACAGCTCTGGGAAAAAATTCCGCCGCAGCCTCTGGCACTGCTTCAGGAGATTGACGCGTTCAGTGTGCATTGCGACTGGCTGTTTCTGCGGGAAGAAACGGCGAAATCGCTGAGAAAGGCCGGTTATCAGATCTTTTGCTATACACCGAATTATCCGGAGCTGGTCGCGCATTATGCGGACTGGGGAGTGGGAATGCTGATAACGGATAACCCTGCAATATACAGGGACGAAAATCGTTTTTCTTAATGCTATATTGCATCAGTATTACACCGGCCTCTTCCGACAGGCCGGTGTTT