Homologs in group_775

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03585 FBDBKF_03585 80.1 Morganella morganii S1 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
EHELCC_06950 EHELCC_06950 80.1 Morganella morganii S2 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
NLDBIP_07275 NLDBIP_07275 80.1 Morganella morganii S4 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
LHKJJB_06810 LHKJJB_06810 80.1 Morganella morganii S3 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
HKOGLL_04120 HKOGLL_04120 80.1 Morganella morganii S5 glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
F4V73_RS11285 F4V73_RS11285 79.6 Morganella psychrotolerans glpC anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC

Distribution of the homologs in the orthogroup group_775

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_775

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A996 0.0 620 71 0 395 1 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Escherichia coli (strain K12)
P0A997 0.0 620 71 0 395 3 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Escherichia coli O157:H7
P43801 0.0 520 58 2 399 3 glpC Anaerobic glycerol-3-phosphate dehydrogenase subunit C Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57557 1.3e-24 108 24 12 399 3 MJ0092 Uncharacterized iron-sulfur protein MJ0092 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q6LYC4 2.02e-23 105 26 15 391 3 MMP1067 Uncharacterized iron-sulfur protein MMP1067 Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
P52074 1.39e-15 81 22 10 407 1 glcF Glycolate oxidase iron-sulfur subunit Escherichia coli (strain K12)
P96797 1.71e-15 81 22 15 437 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina barkeri (strain Fusaro / DSM 804)
D9PUX5 4.55e-14 77 23 12 394 1 tfrB Fumarate reductase (CoM/CoB) subunit B Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg)
A9VI76 6.88e-14 74 26 8 231 3 lutA1 Lactate utilization protein A 1 Bacillus mycoides (strain KBAB4)
A0A0E3NEE1 1.84e-13 75 22 16 424 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina thermophila (strain ATCC 43570 / DSM 1825 / OCM 12 / VKM B-1830 / TM-1)
Q8PVW3 1.55e-12 72 21 12 434 1 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
Q9KBU2 1.6e-12 70 26 9 216 3 lutA Lactate utilization protein A Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q5WJE1 5.32e-12 68 27 10 222 3 lutA Lactate utilization protein A Shouchella clausii (strain KSM-K16)
Q8TSV7 8.8e-12 69 21 12 434 3 hdrD Dihydromethanophenazine:CoB--CoM heterodisulfide reductase subunit D Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
C4L0S2 2.45e-11 67 25 10 243 3 lutA Lactate utilization protein A Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
P77252 5.34e-11 65 23 6 189 3 ykgE Uncharacterized protein YkgE Escherichia coli (strain K12)
A4IK96 5.75e-11 65 25 6 190 3 lutA Lactate utilization protein A Geobacillus thermodenitrificans (strain NG80-2)
Q5L300 2.13e-10 63 27 10 222 3 lutA Lactate utilization protein A Geobacillus kaustophilus (strain HTA426)
B7GLD6 2.14e-10 63 26 7 190 3 lutA Lactate utilization protein A Anoxybacillus flavithermus (strain DSM 21510 / WK1)
Q81ND5 3.16e-10 63 22 6 214 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis
C3P1X2 3.16e-10 63 22 6 214 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis (strain A0248)
C3LCL5 3.16e-10 63 22 6 214 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis (strain CDC 684 / NRRL 3495)
B7JF51 4.03e-10 63 22 6 214 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain AH820)
Q62Q36 4.06e-10 63 25 9 221 3 lutA Lactate utilization protein A Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46)
C1EKT5 4.82e-10 63 22 7 248 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain 03BB102)
A7Z902 5.13e-10 62 27 6 187 3 lutA Lactate utilization protein A Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
Q638X2 8.61e-10 62 21 7 248 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain ZK / E33L)
B9IRL0 1.3e-09 61 21 7 248 3 lutA2 Lactate utilization protein A 2 Bacillus cereus (strain Q1)
C5D587 2.88e-09 60 25 9 221 3 lutA Lactate utilization protein A Geobacillus sp. (strain WCH70)
P77748 4.48e-09 62 21 10 364 1 ydiJ D-2-hydroxyglutarate dehydrogenase Escherichia coli (strain K12)
O07020 6.02e-09 59 25 8 218 1 lutA Lactate utilization protein A Bacillus subtilis (strain 168)
Q8ET92 1.37e-08 58 24 6 186 3 lutA Lactate utilization protein A Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
P94534 1.83e-08 59 22 13 362 3 glcF Probable glycolate oxidase iron-sulfur subunit Bacillus subtilis (strain 168)
Q88EH0 1.34e-07 57 19 12 363 2 ydiJ D-2-hydroxyglutarate dehydrogenase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
B1HVX6 2.06e-07 55 25 8 199 3 lutA Lactate utilization protein A Lysinibacillus sphaericus (strain C3-41)
Q57252 2.68e-06 53 21 14 374 1 HI_1163 D-2-hydroxyglutarate dehydrogenase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q6HLP2 4.51e-06 51 25 7 190 3 lutA Lactate utilization protein A Bacillus thuringiensis subsp. konkukian (strain 97-27)
B7I0K9 4.51e-06 51 25 7 190 3 lutA Lactate utilization protein A Bacillus cereus (strain AH187)
Q73BK2 4.51e-06 51 25 7 190 3 lutA Lactate utilization protein A Bacillus cereus (strain ATCC 10987 / NRS 248)
A0RBC7 4.51e-06 51 25 7 190 3 lutA Lactate utilization protein A Bacillus thuringiensis (strain Al Hakam)
C3LAQ4 4.51e-06 51 25 7 190 3 lutA2 Lactate utilization protein A 2 Bacillus anthracis (strain CDC 684 / NRRL 3495)
Q63E67 4.51e-06 51 25 7 190 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain ZK / E33L)
B9IUP3 4.51e-06 51 25 7 190 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain Q1)
C1EM10 4.51e-06 51 25 7 190 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain 03BB102)
Q81TG2 4.51e-06 51 25 7 190 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis
C3P4C3 4.51e-06 51 25 7 190 3 lutA1 Lactate utilization protein A 1 Bacillus anthracis (strain A0248)
B7JF00 4.77e-06 50 25 7 190 3 lutA1 Lactate utilization protein A 1 Bacillus cereus (strain AH820)
Q81GA5 6.41e-06 50 25 7 190 3 lutA Lactate utilization protein A Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
B7HH58 6.41e-06 50 25 7 190 3 lutA Lactate utilization protein A Bacillus cereus (strain B4264)
A0A0H3KZS3 7.62e-06 52 20 11 360 1 ydiJ D-2-hydroxyglutarate dehydrogenase Pantoea ananatis (strain AJ13355)
A8FDN4 1.33e-05 49 24 9 221 3 lutA Lactate utilization protein A Bacillus pumilus (strain SAFR-032)
B9E9G8 1.88e-05 49 26 10 229 3 lutA Lactate utilization protein A Macrococcus caseolyticus (strain JCSC5402)
A7GMJ2 2.35e-05 48 25 7 188 3 lutA Lactate utilization protein A Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98)
A9VKN0 3.96e-05 48 23 8 196 3 lutA2 Lactate utilization protein A 2 Bacillus mycoides (strain KBAB4)
O27906 4.26e-05 47 32 2 85 3 hdrC H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit C Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O27907 7.73e-05 47 22 8 249 3 hdrB H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit B Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
B7IMD3 9.12e-05 47 25 7 190 3 lutA Lactate utilization protein A Bacillus cereus (strain G9842)
Q50755 0.000139 47 22 8 246 1 hdrB H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit B Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg)
Q50754 0.000166 45 31 2 85 1 hdrC H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit C Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg)
B9E9G9 0.001 45 25 10 188 3 lutB Lactate utilization protein B Macrococcus caseolyticus (strain JCSC5402)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17880
Feature type CDS
Gene glpC
Product anaerobic glycerol-3-phosphate dehydrogenase subunit GlpC
Location 3928407 - 3929600 (strand: 1)
Length 1194 (nucleotides) / 397 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_775
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02754 Cysteine-rich domain
PF13183 4Fe-4S dicluster domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0247 Energy production and conversion (C) C Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00113 glycerol-3-phosphate dehydrogenase subunit C Glycerophospholipid metabolism
Biosynthesis of secondary metabolites		 -

Protein Sequence

MSLQDTSFESCIKCTVCTTYCPVAKVNPLYPGPKQAGPDGERLRLKDPMLYDEALKYCTNCKRCEVACPSDVKIGDIISRAKLNYNPKTPKIRDAILSHTDLMGTLSTPMAPIVNTITGLKPVRKILDKALKIDHRRELPKYSFGTFRTWMKKQVEEQARFKDQVAFFHGCYANYNHPQLGKDLVKVFNKMDIGVQLLKREKCCGVALIANGFVKQAKKQATVNLESLTEKIVENNIPVVATSSTCTFTIRDEYEHILDIDTSKVRENIELATRYIYRLLEEGRELPLKHTPLKVVYHTPCHMEKMGWAAYSIDLIKRIPGVEVIVLDSQCCGIAGTYGFKSENYDVAQGIGAGLFRQIEESGCDLVITDCETCKWQIEMSTTKKCEHPISLLARAL

Flanking regions ( +/- flanking 50bp)

CAGAGTGATAAATCGCAGCACACCACATCTGCGGCTGTGGAGGCAGTACTATGAGTTTACAAGATACCAGTTTTGAAAGTTGTATTAAATGTACAGTTTGTACGACCTATTGTCCTGTGGCAAAGGTCAATCCACTCTATCCAGGACCTAAACAAGCAGGCCCTGATGGTGAGCGTTTACGCTTAAAAGATCCCATGCTTTATGATGAAGCACTGAAATACTGTACTAACTGTAAACGTTGTGAAGTGGCATGTCCTTCAGATGTAAAAATAGGGGATATCATTTCCCGTGCTAAACTTAACTACAATCCTAAAACACCTAAAATTCGTGATGCTATTTTAAGTCATACTGATTTAATGGGAACGCTCTCTACGCCAATGGCGCCGATTGTTAACACTATTACCGGATTAAAACCAGTACGTAAAATCTTGGATAAAGCGCTTAAAATCGACCATCGTCGTGAATTACCCAAATACTCTTTTGGTACATTTAGAACATGGATGAAAAAACAGGTTGAAGAGCAAGCACGCTTTAAAGATCAGGTTGCGTTTTTCCACGGTTGCTATGCTAACTACAATCACCCTCAATTAGGGAAAGATTTAGTTAAAGTATTCAATAAAATGGATATTGGTGTTCAACTATTAAAACGTGAAAAATGTTGTGGTGTTGCATTAATTGCCAACGGCTTTGTGAAACAAGCGAAAAAACAAGCTACCGTAAACCTTGAATCTCTGACAGAAAAAATTGTGGAGAACAACATTCCGGTTGTTGCTACATCTTCTACTTGTACTTTCACTATTCGTGATGAATATGAACATATTCTAGATATTGATACTTCAAAAGTACGGGAAAATATAGAATTAGCAACACGTTATATTTATCGGTTATTGGAAGAAGGGCGTGAATTACCATTAAAACATACCCCATTAAAAGTGGTTTATCATACCCCTTGCCATATGGAAAAAATGGGGTGGGCGGCTTACTCCATTGATTTAATCAAACGTATTCCTGGGGTAGAAGTGATTGTATTAGATTCACAATGTTGTGGTATTGCCGGTACTTATGGTTTTAAATCGGAAAACTACGATGTTGCGCAAGGCATTGGGGCGGGATTATTCCGTCAAATTGAAGAGAGTGGTTGTGATTTAGTCATTACAGATTGCGAAACCTGTAAATGGCAAATAGAAATGTCAACAACCAAAAAATGTGAACACCCAATTAGCTTATTAGCTCGGGCATTGTAGAAAAAATTAATGAGATAACAATAACGTAGTCACTGATTACAATAACAAGC