Homologs in group_198

Help

8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11815 FBDBKF_11815 37.7 Morganella morganii S1 murP PTS N-acetylmuramic acid transporter subunit IIBC
EHELCC_14490 EHELCC_14490 37.7 Morganella morganii S2 murP PTS N-acetylmuramic acid transporter subunit IIBC
NLDBIP_15585 NLDBIP_15585 37.7 Morganella morganii S4 murP PTS N-acetylmuramic acid transporter subunit IIBC
LHKJJB_15025 LHKJJB_15025 37.7 Morganella morganii S3 murP PTS N-acetylmuramic acid transporter subunit IIBC
HKOGLL_14145 HKOGLL_14145 37.7 Morganella morganii S5 murP PTS N-acetylmuramic acid transporter subunit IIBC
F4V73_RS14840 F4V73_RS14840 38.6 Morganella psychrotolerans murP PTS N-acetylmuramic acid transporter subunit IIBC
PMI_RS01405 PMI_RS01405 27.8 Proteus mirabilis HI4320 treB PTS trehalose transporter subunit IIBC
PMI_RS10970 PMI_RS10970 25.3 Proteus mirabilis HI4320 - beta-glucoside-specific PTS transporter subunit IIABC

Distribution of the homologs in the orthogroup group_198

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_198

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q797S1 8.88e-102 314 39 7 454 3 ybbF Putative PTS system EIIBC component YbbF Bacillus subtilis (strain 168)
Q7A1Y1 4.44e-80 259 35 9 471 3 MW0166 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain MW2)
Q6GCT4 4.44e-80 259 35 9 471 3 SAS0167 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain MSSA476)
Q7A804 4.44e-80 259 35 9 471 1 SA0186 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain N315)
Q99X29 4.44e-80 259 35 9 471 3 SAV0192 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HJI0 4.44e-80 259 35 9 471 3 SACOL0178 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain COL)
Q2G1G5 4.44e-80 259 35 9 471 3 SAOUHSC_00158 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FK70 4.44e-80 259 35 9 471 1 murP PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain USA300)
Q6GKB4 4.68e-80 259 35 9 471 3 SAR0193 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain MRSA252)
Q2YV12 9.27e-80 258 35 9 471 3 SAB0132 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q49ZN7 8.41e-77 250 37 11 468 3 SSP0594 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q9CKN5 5.74e-75 245 35 11 469 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Pasteurella multocida (strain Pm70)
Q4L8H5 7.34e-74 243 34 9 470 3 SH0741 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus haemolyticus (strain JCSC1435)
Q8CNB2 2.35e-71 236 35 10 474 3 SE_1890 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HLT2 2.35e-71 236 35 10 474 3 SERP1900 PTS system MurNAc-GlcNAc-specific EIIBC component Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
P05306 6.71e-69 229 32 11 458 1 sacP PTS system sucrose-specific EIIBC component Bacillus subtilis (strain 168)
Q7MBS2 3.2e-68 228 33 13 488 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Vibrio vulnificus (strain YJ016)
Q8D4Z3 3.34e-68 228 33 13 488 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Vibrio vulnificus (strain CMCP6)
Q7N9D9 1.63e-66 224 32 10 477 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q87FD5 2.43e-65 220 32 12 480 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q8FFA9 4.58e-64 217 33 13 478 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8XBJ1 4.98e-64 217 33 13 478 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Escherichia coli O157:H7
P15400 1.29e-63 215 33 11 466 1 sacX Probable PTS system sucrose-specific EIIBC component Bacillus subtilis (strain 168)
Q9KVD9 1.8e-63 215 33 14 483 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q1R8U3 1.92e-63 215 33 13 478 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Escherichia coli (strain UTI89 / UPEC)
Q32DC5 2.84e-63 215 33 13 481 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Shigella dysenteriae serotype 1 (strain Sd197)
P77272 3.29e-63 214 33 13 481 1 murP PTS system N-acetylmuramic acid-specific EIIBC component Escherichia coli (strain K12)
Q83QN3 3.43e-63 214 33 13 478 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Shigella flexneri
Q31Y50 1.79e-62 213 33 13 481 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Shigella boydii serotype 4 (strain Sb227)
P27219 1.27e-61 210 33 12 456 3 scrA PTS system sucrose-specific EIIBC component Klebsiella pneumoniae
P08470 1.63e-61 209 32 11 455 3 scrA PTS system sucrose-specific EIIBC component Salmonella typhimurium
Q5E5T6 2.25e-59 205 32 12 481 3 murP PTS system N-acetylmuramic acid-specific EIIBC component Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q9CJZ2 7.17e-53 187 29 12 475 3 scrA PTS system sucrose-specific EIIBC component Pasteurella multocida (strain Pm70)
Q9KF90 1.36e-50 184 30 9 425 3 bglP PTS system beta-glucoside-specific EIIBCA component Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P51184 2.39e-49 178 30 12 464 3 scrA PTS system sucrose-specific EIIBC component Staphylococcus xylosus
P22825 1.99e-48 176 29 9 472 3 scrA PTS system sucrose-specific EIIBC component Vibrio alginolyticus
P40739 1.75e-47 175 29 6 452 3 bglP PTS system beta-glucoside-specific EIIBCA component Bacillus subtilis (strain 168)
P26207 6.62e-41 157 28 11 464 3 arbF PTS system beta-glucoside-specific EIIBCA component Dickeya chrysanthemi
P39794 1.42e-40 154 27 8 418 2 treP PTS system trehalose-specific EIIBC component Bacillus subtilis (strain 168)
P12655 1.78e-37 148 28 12 469 1 scrA PTS system sucrose-specific EIIBCA component Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P08722 1.33e-36 145 26 9 419 1 bglF PTS system beta-glucoside-specific EIIBCA component Escherichia coli (strain K12)
P43470 1.9e-35 142 26 10 455 3 scrA PTS system sucrose-specific EIIBCA component Pediococcus pentosaceus
P24241 1.62e-32 132 27 13 481 3 ascF PTS system arbutin-, cellobiose-, and salicin-specific EIIBC component Escherichia coli (strain K12)
P36672 2.43e-32 131 25 10 421 1 treB PTS system trehalose-specific EIIBC component Escherichia coli (strain K12)
Q45298 5.97e-24 108 26 13 434 3 ptsG PTS system glucose-specific EIIBCA component Corynebacterium glutamicum
Q46072 2.56e-23 106 26 13 434 4 ptsM PTS system mannose-specific EIIBCA component Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
O34521 1.94e-05 50 50 2 56 1 nagP PTS system N-acetylglucosamine-specific EIICB component Bacillus subtilis (strain 168)
P54715 2.74e-05 50 32 1 87 1 malP PTS system maltose-specific EIICB component Bacillus subtilis (strain 168)
P19642 5.93e-05 49 44 0 52 1 malX PTS system maltose-specific EIICB component Escherichia coli (strain K12)
P45604 0.000397 46 38 4 88 3 nagE PTS system N-acetylglucosamine-specific EIICBA component Klebsiella pneumoniae
O06900 0.000885 45 34 1 70 4 malB PTS system alpha-glucoside-specific EIICB component Fusobacterium mortiferum

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17475
Feature type CDS
Gene -
Product PTS transporter subunit EIIC
Location 3835253 - 3836617 (strand: 1)
Length 1365 (nucleotides) / 454 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_198
Orthogroup size 9
N. genomes 7

Actions

Genomic region

Domains

PF00367 phosphotransferase system, EIIB
PF02378 Phosphotransferase system, EIIC

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1263 Carbohydrate transport and metabolism (G) G Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific

Protein Sequence

MANKIEHLDTLASEIEKQAGGFSNIATLTHCMTRIRLILKDSSLFNTEALKQVEGVKGVVFNGEQHQVIVGMGTAAKVYSIMNKRMQKNTDNSEEAPASTPVKKGFSIRRMLNTLAAIFVPTIPALIGCGLIMGLINIIRLVAPGLVDQFPELFKLFKLIGSTVFAYLSIMIGINTAKELGASTSIGAVMAGLLAMPGLADITLFGEKLQPNSGGIFAVLMVVVFSSKLELWFRSIVKESLDLILTPFVTILVSALVAIMVFQPIGHYLNQLLAQGVSLSLLNHGGGAVVTGAALGGSFLFLLLTGLHQGLIPIHTEILNTFGLNYLFPILAMGGMGQVGSCFWVYLRTKNQRLKKTLMGALPVGIFGVGEPLLFGVSLPLGKPFIAGCIGGAAGGALMAYFQVGIIIPFGTAGLSLIPLVGDGQIIKFLIAVLGAWVVGFIASILIGFTDPEK

Flanking regions ( +/- flanking 50bp)

TTAATGAATAACAATATCAGTCAATCCTCTGAACTCTAGCAGGCACAATTATGGCTAATAAAATAGAACATCTCGACACCTTAGCATCAGAAATAGAAAAACAGGCTGGTGGGTTTAGCAATATCGCAACCTTAACACATTGCATGACCCGTATTCGTTTGATCTTAAAAGATAGTTCGCTATTTAATACCGAAGCATTAAAACAAGTCGAAGGTGTCAAAGGCGTGGTATTTAATGGCGAGCAACATCAAGTCATAGTAGGAATGGGAACGGCCGCCAAAGTTTATTCAATCATGAATAAACGTATGCAAAAAAACACAGATAATAGCGAAGAAGCCCCTGCGTCAACACCAGTGAAAAAAGGGTTTTCCATACGCCGTATGCTAAATACGTTGGCGGCTATTTTTGTTCCTACTATCCCAGCATTAATTGGCTGTGGTTTAATTATGGGGCTAATTAATATTATTCGTTTAGTGGCACCCGGCTTAGTTGATCAGTTTCCTGAACTCTTTAAGCTATTTAAACTGATCGGAAGTACCGTATTTGCTTATCTCTCTATTATGATAGGTATAAATACGGCTAAAGAGTTAGGGGCTTCAACCTCCATAGGTGCTGTTATGGCGGGATTATTAGCCATGCCGGGACTGGCTGATATCACATTATTTGGTGAGAAATTACAGCCTAATAGTGGTGGGATCTTCGCGGTCTTAATGGTGGTGGTATTTTCTTCAAAATTAGAACTATGGTTTCGCAGTATTGTAAAAGAGAGTCTTGATCTTATTTTAACCCCCTTTGTCACTATTTTAGTTTCTGCGTTAGTGGCAATTATGGTATTCCAACCTATAGGTCATTATCTGAATCAACTATTAGCGCAAGGCGTATCCTTATCACTATTAAATCATGGTGGCGGTGCGGTTGTGACAGGCGCAGCGTTAGGGGGCAGTTTCTTATTCTTATTACTAACCGGTCTACACCAAGGTTTAATACCGATCCACACTGAAATTTTAAATACCTTTGGGTTAAATTACCTATTCCCTATTTTAGCAATGGGCGGAATGGGGCAAGTAGGCTCTTGTTTCTGGGTTTATTTACGTACTAAAAACCAACGCTTAAAGAAAACGTTAATGGGTGCGTTGCCTGTCGGAATTTTCGGCGTGGGTGAGCCTTTATTATTTGGTGTCTCTTTACCTTTAGGTAAGCCCTTTATTGCAGGTTGTATTGGCGGGGCTGCGGGTGGTGCATTAATGGCTTATTTTCAGGTTGGGATCATTATTCCATTTGGTACTGCTGGGTTATCATTAATTCCACTGGTGGGGGATGGGCAGATCATCAAATTCCTTATCGCAGTATTGGGGGCTTGGGTTGTCGGTTTTATTGCCAGTATATTAATCGGATTTACCGATCCAGAAAAATAAGTCAGAAGAAGAAAAGAAAAAGGATAATAGAATGTCAACACTGACTAAGA