Homologs in group_1348

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08350 FBDBKF_08350 49.6 Morganella morganii S1 yigA DUF484 domain-containing protein
EHELCC_13175 EHELCC_13175 49.6 Morganella morganii S2 yigA DUF484 domain-containing protein
NLDBIP_13515 NLDBIP_13515 49.6 Morganella morganii S4 yigA DUF484 domain-containing protein
LHKJJB_13040 LHKJJB_13040 49.6 Morganella morganii S3 yigA DUF484 domain-containing protein
HKOGLL_11990 HKOGLL_11990 49.6 Morganella morganii S5 yigA DUF484 domain-containing protein
F4V73_RS09550 F4V73_RS09550 49.2 Morganella psychrotolerans - DUF484 family protein

Distribution of the homologs in the orthogroup group_1348

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1348

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q83IW8 5.5e-85 255 54 0 222 4 yigA Uncharacterized protein YigA Shigella flexneri
P23305 6.85e-85 255 54 0 222 4 yigA Uncharacterized protein YigA Escherichia coli (strain K12)
P55886 1.87e-84 254 55 0 219 4 yigA Uncharacterized protein YigA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS16600
Feature type CDS
Gene -
Product DUF484 domain-containing protein
Location 3659303 - 3660013 (strand: 1)
Length 711 (nucleotides) / 236 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1348
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04340 Protein of unknown function, DUF484

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3159 Function unknown (S) S Uncharacterized conserved protein YigA, DUF484 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09921 uncharacterized protein - -

Protein Sequence

MTDKNEQFCYPEKNELNDQTIIDYLKEHPGFFIRNASYIEQMQVPHPVRGSISLVEWIMSRQRTRIHYLEEDMRLLIEQAAENESLFSQLLRLISELSRCNSLKEMLEQLNLWAKELGLYSVQLRLFTDRWQLQPPLDAQTLALSRQTFEHFRIQRMGDNNHYLGPLNGQEMMLLMPNVRRSGSVALSLLGHYGDLGVIIFNSRDSQHFQEGMGTAMLDKLAQILPELLTRWIARQ

Flanking regions ( +/- flanking 50bp)

TTTATGATGGAACAATCCAGCTATAATATTATTTTTGAGAGGTGCTTGGTATGACGGATAAGAATGAGCAGTTTTGTTACCCTGAGAAAAACGAACTCAACGATCAAACCATCATTGATTATCTCAAGGAGCATCCTGGTTTCTTTATCCGTAATGCCAGCTATATTGAGCAAATGCAAGTTCCTCACCCAGTAAGAGGGAGTATCTCATTAGTTGAGTGGATAATGTCACGTCAGCGAACACGTATTCATTATCTTGAAGAGGATATGCGTTTGTTGATTGAGCAAGCTGCAGAAAATGAATCTCTATTTAGCCAATTACTAAGGCTTATTTCTGAGTTATCCCGCTGTAATTCATTAAAGGAAATGCTGGAACAGTTAAATCTTTGGGCGAAGGAGTTAGGGCTTTACTCAGTACAACTGCGTCTTTTCACCGATCGTTGGCAATTACAACCTCCTTTAGATGCTCAAACACTCGCACTATCTCGTCAAACATTTGAGCATTTCCGTATTCAGCGTATGGGCGATAATAATCACTATTTGGGGCCATTAAATGGCCAAGAAATGATGTTATTAATGCCTAATGTTCGTCGTTCTGGCTCTGTGGCACTCTCATTATTAGGGCATTATGGCGATTTAGGGGTGATCATTTTTAATAGTCGAGATAGCCAACATTTTCAAGAAGGTATGGGAACGGCAATGTTGGATAAACTCGCACAGATATTACCTGAGTTATTAACTCGCTGGATCGCAAGACAATGAGCCAAATTATTGACGTCCCTGAAACACTCTCATTAGCCATTGATAGCTTC