Homologs in group_1404

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08350 FBDBKF_08350 83.1 Morganella morganii S1 yigA DUF484 domain-containing protein
EHELCC_13175 EHELCC_13175 83.1 Morganella morganii S2 yigA DUF484 domain-containing protein
NLDBIP_13515 NLDBIP_13515 83.1 Morganella morganii S4 yigA DUF484 domain-containing protein
LHKJJB_13040 LHKJJB_13040 83.1 Morganella morganii S3 yigA DUF484 domain-containing protein
HKOGLL_11990 HKOGLL_11990 83.1 Morganella morganii S5 yigA DUF484 domain-containing protein
PMI_RS16600 PMI_RS16600 49.2 Proteus mirabilis HI4320 - DUF484 domain-containing protein

Distribution of the homologs in the orthogroup group_1404

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1404

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23305 2.2e-76 233 51 0 224 4 yigA Uncharacterized protein YigA Escherichia coli (strain K12)
Q83IW8 3.44e-76 233 51 0 224 4 yigA Uncharacterized protein YigA Shigella flexneri
P55886 3.2e-73 225 50 0 216 4 yigA Uncharacterized protein YigA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09550
Feature type CDS
Gene -
Product DUF484 family protein
Location 9802 - 10518 (strand: 1)
Length 717 (nucleotides) / 238 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1404
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04340 Protein of unknown function, DUF484

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3159 Function unknown (S) S Uncharacterized conserved protein YigA, DUF484 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09921 uncharacterized protein - -

Protein Sequence

MDSLQDTAATQAERLREPDDAAVLAYLKAHPDFFIRNASQIAEMSIPHPVKGAVSLVEWQLGRQRNRIDTLTDDLAQLMMAAGENEQLFSRLLKLLASLSAATSLDDFSERLNIWAKSLKLSHARIRLFSDCWRLGAPFRNQELALSRSHFETMRLSRFGDRNHFLGRLTAPEIQLLLPDSAFVGSAAVSLLGAQHDLGVVVFVSRDKEHYHNGMGTAMLDQVAYFLPQLLQRWAELA

Flanking regions ( +/- flanking 50bp)

TATTTGATGGTGTTATCCATCTTTAAATGTCATAAAGAGGATGAATATCGATGGACAGTCTACAGGATACGGCTGCCACGCAGGCTGAACGTCTGCGTGAACCGGATGATGCCGCCGTTCTCGCGTACCTGAAAGCACATCCGGATTTCTTTATCCGCAACGCCTCACAGATTGCAGAAATGAGTATCCCACATCCGGTAAAAGGGGCGGTTTCTTTGGTTGAATGGCAACTGGGGCGTCAGCGTAACCGGATTGATACCCTGACGGATGACCTGGCTCAGCTGATGATGGCGGCCGGGGAAAATGAACAACTGTTCTCGCGTCTTCTCAAACTTCTGGCCTCTCTTTCTGCTGCCACGTCACTCGATGATTTTTCTGAACGTCTGAATATCTGGGCAAAGAGCCTGAAACTCAGTCATGCGCGGATCCGTCTGTTTTCGGATTGCTGGCGTCTGGGTGCGCCGTTCCGCAATCAGGAACTGGCACTGTCCCGCTCACATTTTGAAACGATGCGACTTTCCCGTTTTGGTGATCGCAACCACTTTCTCGGTCGTCTGACTGCACCTGAAATTCAGCTGCTGCTGCCGGACAGTGCTTTTGTCGGTTCGGCGGCGGTGTCGTTGCTCGGCGCACAACATGACCTCGGTGTGGTGGTATTCGTCAGCCGTGATAAAGAGCATTACCATAACGGCATGGGTACGGCGATGCTGGATCAGGTCGCGTATTTCCTGCCGCAATTGCTGCAACGCTGGGCAGAACTGGCATGACCGGCACACCAACAGAACAATTGCTCGTACCCGTGGAGCAGTTTTTGCAA