Orthogroup:group_1348


Homologs in group_1348

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07860 FBDBKF_07860 Morganella morganii S1 norM Na+-driven multidrug efflux pump, DinF/NorM/MATE family
EHELCC_13690 EHELCC_13690 Morganella morganii S2 norM Na+-driven multidrug efflux pump, DinF/NorM/MATE family
NLDBIP_14135 NLDBIP_14135 Morganella morganii S4 norM Na+-driven multidrug efflux pump, DinF/NorM/MATE family
LHKJJB_08715 LHKJJB_08715 Morganella morganii S3 norM Na+-driven multidrug efflux pump, DinF/NorM/MATE family
HKOGLL_08265 HKOGLL_08265 Morganella morganii S5 norM Na+-driven multidrug efflux pump, DinF/NorM/MATE family
F4V73_RS13160 F4V73_RS13160 Morganella psychrotolerans - MATE family efflux transporter
PMI_RS00720 PMI_RS00720 Proteus mirabilis HI4320 - MATE family efflux transporter

Distribution of group_1348 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1348 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1348

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1348.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 norM 5
2 - 2

Product

# Product Occurence
1 Na+-driven multidrug efflux pump, DinF/NorM/MATE family 5
2 MATE family efflux transporter 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0534 7 V Defense mechanisms (V) Na+-driven multidrug efflux pump, DinF/NorM/MATE family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K26937 7 MATE family, multidrug efflux pump - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01554 7 MatE

Annotations of the 151 SwissProt hits

Annotation Number of occurrences
Ethionine resistance-conferring protein 1 1
FAD transporter 1
Multidrug and toxin extrusion protein 1 7
Multidrug and toxin extrusion protein 2 4
Multidrug resistance protein HmrM 1
Multidrug resistance protein MdtK 63
Multidrug resistance protein NorM 7
Multidrug resistance protein PmpM 1
Probable FMN/FAD exporter YeeO 1
Probable multidrug resistance protein NorM 48
Probable multidrug resistance protein YoeA 1
Protein DETOXIFICATION 29 1
Protein DETOXIFICATION 30 1
Protein DETOXIFICATION 34 1
Protein DETOXIFICATION 37 1
Protein DETOXIFICATION 38 1
Protein DETOXIFICATION 39 1
Protein DETOXIFICATION 44, chloroplastic 1
Protein DETOXIFICATION 46, chloroplastic 1
Protein DETOXIFICATION 50 1
Protein DETOXIFICATION 51 1
Protein DETOXIFICATION 52 1
Protein DETOXIFICATION 53 1
Stage V sporulation protein B 1
Uncharacterized transporter MJ0709 1
Uncharacterized transporter YDR338C 1
Uncharacterized transporter YisQ 1

Protein length

Min length 446
Max length 448
Mean length (sd) 447.7 (0.8)
Median length 448.0

Protein length distribution