Homologs in group_3680

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3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS05850 F4V73_RS05850 23.2 Morganella psychrotolerans - type II toxin-antitoxin system HipA family toxin
F4V73_RS10090 F4V73_RS10090 22.8 Morganella psychrotolerans - HipA domain-containing protein
F4V73_RS10150 F4V73_RS10150 50.4 Morganella psychrotolerans - type II toxin-antitoxin system HipA family toxin

Distribution of the homologs in the orthogroup group_3680

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3680

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23874 1.37e-161 465 52 1 423 1 hipA Serine/threonine-protein kinase toxin HipA Escherichia coli (strain K12)
Q8FHF4 9.62e-160 461 52 1 423 3 hipA Serine/threonine-protein kinase toxin HipA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P55564 2.25e-40 152 27 9 407 3 NGR_a02540 Putative kinase Y4mE Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q8EIX3 3.05e-22 101 26 13 351 1 hipA Serine/threonine-protein kinase toxin HipA Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
P55412 3.39e-14 77 24 16 446 3 NGR_a04040 Putative kinase Y4dM Sinorhizobium fredii (strain NBRC 101917 / NGR234)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15470
Feature type CDS
Gene -
Product type II toxin-antitoxin system HipA family toxin
Location 3439488 - 3440801 (strand: -1)
Length 1314 (nucleotides) / 437 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3680
Orthogroup size 4
N. genomes 2

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Genomic region

Domains

PF07804 HipA-like C-terminal domain
PF13657 HipA N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3550 Signal transduction mechanisms (T) T Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] - -

Protein Sequence

MASLDVYMNEYYVGIFTKKSSGAHSFQYTEDWVNQPGSRPISLSMPLQLQEYQGDCVYNFFDNLLPDNTEIRNRIVSRYNANSNQPFDLLAAIGADTVGALRLLPSGSTPADIKKIEYQKLNDIELEKILLGYKSNTPLGMLKEYTDFRISIAGAQEKTALLLKDNHWCVPHNNTPTTHIIKLPIGVIESHSYTMDLSNSVENEYLCTLIAKEFDLPVPHCSIIKTKNVKALAVERFDRKYSSDKSWIIRLPQEDFCQILNIPSALKYENEGGPGIIDIMKYLLGSSNADQDRFHFMKAQVLFWLLAATDGHAKNFSVFINQEGRFHLTPLYDIMSIYPNFGGRGLNPRDAKLAMGLKASRGKKYAIEQIFPRHFYQTAEAVGFDPSLMSDILRYFYQEMDDVIQRVKQQLPEDFPSEISNTILDGMKARAVRLANI

Flanking regions ( +/- flanking 50bp)

ATGCTAAAAATAATTTAGCACACAAAAGTGAATGGAAAGAGGAGTGGTAAATGGCGAGTCTTGATGTATATATGAATGAATACTATGTGGGCATCTTTACTAAAAAAAGCTCAGGTGCGCATTCATTCCAATATACTGAAGATTGGGTTAATCAACCAGGAAGTCGTCCCATCTCTCTTTCGATGCCATTACAGCTTCAAGAATATCAAGGAGACTGTGTCTATAATTTCTTTGATAATCTGTTACCTGATAATACTGAAATTAGAAATCGTATTGTGAGTCGCTATAATGCGAACTCAAATCAACCCTTTGACCTATTAGCGGCTATCGGTGCAGATACTGTTGGTGCATTAAGGTTACTTCCTAGTGGCAGTACGCCTGCGGATATCAAAAAAATAGAATATCAAAAACTCAATGATATTGAGCTTGAAAAAATTCTACTAGGATATAAATCCAATACTCCACTCGGTATGCTTAAAGAATATACTGATTTCAGAATTTCCATCGCTGGAGCACAAGAAAAAACAGCATTACTTTTAAAAGATAATCATTGGTGTGTGCCACATAATAACACACCAACTACCCATATTATTAAACTGCCAATTGGTGTTATTGAAAGTCATTCTTATACAATGGATTTATCCAATAGTGTAGAAAATGAGTATCTTTGTACCTTAATTGCCAAAGAATTTGATCTTCCCGTCCCCCACTGCTCTATTATTAAAACAAAAAATGTTAAAGCGCTTGCTGTAGAACGTTTTGATAGAAAATATTCATCTGATAAATCGTGGATAATACGTTTACCTCAAGAAGATTTTTGCCAAATTTTAAATATACCTTCTGCGCTAAAATATGAAAATGAAGGAGGGCCTGGCATTATCGATATTATGAAATATTTACTTGGCTCATCAAATGCCGATCAAGATCGTTTTCATTTTATGAAGGCACAAGTGCTATTTTGGCTTTTGGCTGCAACGGATGGACACGCAAAGAATTTTTCTGTTTTTATCAACCAAGAAGGACGTTTCCATCTCACTCCCCTTTATGACATTATGTCCATCTATCCCAATTTCGGAGGACGAGGACTTAATCCACGAGATGCAAAACTTGCTATGGGATTAAAAGCAAGCCGAGGCAAAAAATACGCCATAGAACAAATTTTTCCTCGTCATTTCTACCAAACAGCTGAAGCTGTCGGTTTCGATCCTTCATTAATGAGCGATATTCTTCGTTATTTTTATCAAGAAATGGACGATGTCATACAACGCGTAAAACAGCAATTACCCGAGGATTTTCCTTCTGAGATTAGCAATACAATATTAGATGGAATGAAAGCACGCGCTGTTAGATTAGCTAACATTTAGCCATTTACCTGCTATAGCGTGTAAATATTACTTTACCGGTTATAGCAGGT