Homologs in group_3680

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3 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS05850 F4V73_RS05850 32.4 Morganella psychrotolerans - type II toxin-antitoxin system HipA family toxin
F4V73_RS10150 F4V73_RS10150 22.6 Morganella psychrotolerans - type II toxin-antitoxin system HipA family toxin
PMI_RS15470 PMI_RS15470 22.8 Proteus mirabilis HI4320 - type II toxin-antitoxin system HipA family toxin

Distribution of the homologs in the orthogroup group_3680

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3680

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55564 6.86e-10 64 27 4 153 3 NGR_a02540 Putative kinase Y4mE Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q8EIX3 6.25e-08 58 25 6 188 1 hipA Serine/threonine-protein kinase toxin HipA Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
P44033 2.63e-06 52 25 8 196 3 HI_0665 Putative kinase HI_0665 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39410 1.17e-05 51 24 10 275 1 yjjJ Toxin YjjJ Escherichia coli (strain K12)
P23874 8.88e-05 48 25 12 326 1 hipA Serine/threonine-protein kinase toxin HipA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10090
Feature type CDS
Gene -
Product HipA domain-containing protein
Location 125552 - 126829 (strand: 1)
Length 1278 (nucleotides) / 425 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000002
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3680
Orthogroup size 4
N. genomes 2

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Genomic region

Domains

PF07804 HipA-like C-terminal domain
PF13657 HipA N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3550 Signal transduction mechanisms (T) T Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07154 serine/threonine-protein kinase HipA [EC:2.7.11.1] - -

Protein Sequence

MISDNNPDRAYVWIWLPDATQPVIAGVINRDGARFVFNYGRSYLERKDAIPIYETELPLDRGTIFPAPGLQQVSALRDAAPDAWGRRVILNRMMGAQGKDADTERLDELTYLLESGSDRIGGLDFQLSATEYVSRASQSASLEELMQAASMVENGIPLTPELDQALFHGSSLGGARPKAMIESGNRKYIAKFSSSTDTYNVVKAEYVAMRLASMAGLNVASVLIHNTAGKDVILVERFDRIRSDAGWQRRLMVSALTIFGLDEMMARYTSYEDLTDIIRQRFDAPKETLRELFGRLVFNIICGNTDDHARNHAAFCDGKKLRLTPAYDICPQNRAGNEATQAMLITGENRMSNLAVCLSAAAKFLLSEQEAIELISHSIRTVQENWDEICSEASLSEVDRNLLWRRMFLNPFIFEGAPEAIVNLR

Flanking regions ( +/- flanking 50bp)

CTTATCGCTTTTGCCACGTGCAGTGCGCCACCCGAAGAAGATAATAAATGATGATTTCTGATAATAATCCTGACCGTGCGTACGTATGGATCTGGTTACCTGATGCGACCCAGCCGGTTATTGCAGGCGTCATAAACCGGGATGGTGCGAGGTTTGTATTTAACTACGGTCGTAGTTATCTGGAGCGGAAAGATGCTATCCCTATTTATGAAACGGAACTCCCGCTGGACCGGGGAACTATTTTTCCGGCACCGGGACTACAGCAAGTTAGTGCACTACGTGATGCTGCCCCGGATGCATGGGGACGTCGTGTTATTCTGAATCGGATGATGGGTGCTCAGGGTAAAGATGCTGATACTGAAAGGCTGGATGAGCTGACATATCTGCTCGAGTCAGGTTCAGACAGAATCGGGGGGCTTGATTTTCAGCTATCAGCAACAGAGTACGTGTCCCGGGCGTCTCAAAGTGCATCCCTTGAAGAGTTGATGCAGGCAGCATCTATGGTTGAAAACGGTATACCCCTGACTCCTGAACTCGATCAAGCGCTTTTTCATGGTAGTTCATTGGGCGGGGCACGACCAAAGGCAATGATAGAATCCGGGAATCGCAAATATATTGCGAAGTTCTCTTCTTCTACGGATACCTATAATGTCGTGAAAGCAGAATATGTGGCTATGCGGCTGGCTTCTATGGCCGGATTAAATGTTGCATCTGTTCTTATCCATAATACAGCAGGTAAAGATGTCATACTTGTTGAGCGTTTCGACCGTATACGAAGTGATGCAGGGTGGCAGCGTCGTTTGATGGTTTCTGCGCTGACTATTTTTGGCCTTGATGAGATGATGGCAAGATATACGAGTTATGAGGATTTGACAGATATTATTCGTCAGCGCTTTGATGCACCTAAAGAAACACTGCGGGAACTGTTCGGGCGTTTGGTTTTTAATATTATTTGCGGTAACACTGATGATCACGCCAGAAATCATGCGGCATTTTGCGATGGTAAAAAACTCAGACTGACGCCTGCTTATGATATTTGCCCTCAGAATCGTGCCGGTAATGAAGCAACGCAGGCCATGCTGATTACAGGCGAAAACAGAATGAGTAATCTTGCTGTTTGTCTGTCAGCAGCAGCCAAATTTCTGCTGAGTGAACAGGAAGCTATCGAACTTATATCCCACAGTATCAGGACTGTTCAGGAGAACTGGGATGAGATATGTAGTGAAGCCTCATTGAGCGAAGTCGATCGTAATTTATTGTGGAGACGAATGTTTCTCAACCCGTTTATTTTTGAAGGTGCCCCGGAAGCAATTGTGAACCTGCGGTGATCTGTTTTGCTGTCGATTGATTAATCGTAAACTGACAGATAGTTACAACT