Homologs in group_3048

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18210 FBDBKF_18210 69.7 Morganella morganii S1 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
EHELCC_18245 EHELCC_18245 69.7 Morganella morganii S2 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
NLDBIP_18170 NLDBIP_18170 69.7 Morganella morganii S4 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
LHKJJB_18365 LHKJJB_18365 69.7 Morganella morganii S3 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate
HKOGLL_18100 HKOGLL_18100 69.7 Morganella morganii S5 nit2 Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate

Distribution of the homologs in the orthogroup group_3048

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3048

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O59829 3.68e-22 97 25 9 307 3 SPCC965.09 Probable nitrilase C965.09 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9UYV8 3.86e-21 94 25 8 281 1 PYRAB13990 Nitrilase Pyrococcus abyssi (strain GE5 / Orsay)
Q75SP7 9.59e-21 93 28 12 279 1 ramA (R)-stereoselective amidase Pseudomonas sp.
Q9JHW2 1.15e-20 93 26 13 318 1 Nit2 Omega-amidase NIT2 Mus musculus
Q497B0 1.25e-20 92 26 14 319 1 Nit2 Omega-amidase NIT2 Rattus norvegicus
Q9NQR4 1.03e-18 87 25 12 300 1 NIT2 Omega-amidase NIT2 Homo sapiens
Q2T9R6 1.71e-18 87 26 14 319 2 NIT2 Omega-amidase NIT2 Bos taurus
P55176 2.25e-18 87 28 10 309 3 None Hydrolase in pqqF 5'region Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)
Q4VBV9 3.28e-18 86 26 15 328 2 nit2 Omega-amidase NIT2 Danio rerio
Q6INI7 2.59e-17 83 26 13 301 2 nit2b Omega-amidase NIT2-B Xenopus laevis
Q28IE5 3.49e-16 80 26 12 284 2 nit2 Omega-amidase NIT2 Xenopus tropicalis
Q5R4L6 7.4e-16 79 25 12 300 3 NIT2 Omega-amidase NIT2 Pongo abelii
Q5NHL7 1.96e-15 78 25 12 316 1 ctu Citrullinase Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
Q6IR61 2.81e-15 78 26 12 284 2 nit2a Omega-amidase NIT2-A Xenopus laevis
G9AIU0 3.6e-15 78 24 11 324 1 nit Aliphatic nitrilase Rhizobium fredii (strain HH103)
Q8VYF5 8.18e-15 77 24 13 320 1 CPA N-carbamoylputrescine amidase Arabidopsis thaliana
Q9XGI9 6.12e-13 71 23 13 322 2 CPA N-carbamoylputrescine amidase Solanum lycopersicum
Q3HVN1 7.27e-13 71 24 14 327 2 CPA N-carbamoylputrescine amidase Solanum tuberosum
O31664 7.78e-13 70 25 10 266 1 mtnU 2-oxoglutaramate amidase Bacillus subtilis (strain 168)
Q8RUF8 3.79e-12 69 25 14 307 1 NLP3 Omega-amidase, chloroplastic Arabidopsis thaliana
Q557J5 6.06e-12 68 26 12 311 3 nit1-1 Deaminated glutathione amidase Dictyostelium discoideum
P32961 7.24e-12 68 26 10 302 1 NIT1 Nitrilase 1 Arabidopsis thaliana
Q93XI4 8.94e-12 68 25 14 327 2 CPA N-carbamoylputrescine amidase Oryza sativa subsp. japonica
P49954 1.83e-11 67 25 11 281 1 NIT3 Omega-amidase NIT3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P46010 5.53e-11 66 31 9 206 1 NIT3 Nitrilase 3 Arabidopsis thaliana
P54608 1.4e-10 65 25 14 322 3 yhcX Probable hydrolase YhcX Bacillus subtilis (strain 168)
P55177 1.71e-10 63 25 7 284 3 None Hydrolase in agr operon Staphylococcus aureus
P32962 2.28e-10 64 31 9 206 1 NIT2 Nitrilase 2 Arabidopsis thaliana
Q9X0Y0 1.24e-09 62 24 9 285 3 nadE2 Glutamine-dependent NAD(+) synthetase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
C8V9R7 1.48e-09 62 24 13 333 1 cht Cyanide hydratase Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
O76464 1.54e-09 62 23 10 282 1 NitFhit Nitrilase and fragile histidine triad fusion protein NitFhit Drosophila melanogaster
P0DP65 1.54e-09 61 25 7 284 1 yafV Omega-amidase YafV Staphylococcus aureus (strain 04-02981)
O67091 1.7e-09 62 25 12 301 3 nadE Glutamine-dependent NAD(+) synthetase Aquifex aeolicus (strain VF5)
P60327 2.31e-09 61 21 10 287 1 None N-carbamoyl-D-amino acid hydrolase Agrobacterium sp. (strain KNK712)
Q44185 3.13e-09 60 21 10 287 1 None N-carbamoyl-D-amino acid hydrolase Rhizobium radiobacter
D4B1Q8 3.61e-09 60 29 5 169 1 ARB_02388 Arylacetonitrilase Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371)
G2XQT1 5.33e-09 60 24 11 324 1 chy Cyanide hydratase Botryotinia fuckeliana (strain T4)
A0A0P1DJE3 1.33e-08 58 23 11 311 1 nit Arylacetonitrilase Auricularia subglabra (strain TFB-10046 / SS5)
Q6H849 1.55e-08 58 30 7 192 2 NIT4 Bifunctional nitrilase/nitrile hydratase NIT4 Oryza sativa subsp. japonica
Q42965 1.89e-08 58 30 8 194 2 NIT4A Bifunctional nitrilase/nitrile hydratase NIT4A Nicotiana tabacum
Q42966 3.84e-08 57 30 8 194 2 NIT4B Bifunctional nitrilase/nitrile hydratase NIT4B Nicotiana tabacum
Q96UG7 4.49e-08 57 28 6 167 1 chy Cyanide hydratase Fusarium solani
Q5S260 5.25e-08 57 21 10 287 1 None N-carbamoyl-D-amino acid hydrolase Ensifer adhaerens
P46011 6.84e-08 57 30 8 195 1 NIT4 Bifunctional nitrilase/nitrile hydratase NIT4 Arabidopsis thaliana
A0A2H3E4G0 8.45e-08 56 29 6 164 1 ARMGADRAFT_1007240 Cyanide hydratase Armillaria gallica
P9WEU5 1.12e-07 56 29 6 167 1 nit Cyanide hydratase Stereum hirsutum (strain FP-91666)
Q5QGZ8 1.25e-07 56 29 6 188 1 NIT4A Bifunctional nitrilase/nitrile hydratase NIT4A Lupinus angustifolius
Q03217 1.27e-07 56 30 7 164 1 nitA Aliphatic nitrilase Rhodococcus rhodochrous
V5IPE4 1.5e-07 55 25 13 324 1 B23G1.100 Arylacetonitrilase Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
P55178 2.09e-07 54 24 9 251 3 None Hydrolase in agr operon (Fragment) Staphylococcus lugdunensis
B6Q5I3 3.04e-07 54 29 6 163 1 PMAA_032480 Nitrilase Talaromyces marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333)
Q964D8 3.97e-07 54 30 7 170 1 pyd3 Beta-ureidopropionase Dictyostelium discoideum
P32963 1.17e-06 53 27 6 166 1 chy1 Cyanide hydratase Gibberella baccata
Q500U1 2.71e-06 52 28 6 161 1 Psyr_0007 Nitrilase Pseudomonas syringae pv. syringae (strain B728a)
G9N4E3 3.21e-06 51 27 6 165 1 TRIVIDRAFT_77162 Arylacetonitrilase Hypocrea virens (strain Gv29-8 / FGSC 10586)
P32964 3.81e-06 51 27 6 167 1 cht Cyanide hydratase Microdochium sorghi
K2QXC4 5.47e-06 51 27 2 122 1 MPH_08355 Arylacetonitrilase Macrophomina phaseolina (strain MS6)
B2JQY2 5.87e-06 50 28 6 167 1 Bphy_4561 Nitrilase Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815)
Q54JM9 6.42e-06 50 25 9 184 3 nit2 Nitrilase homolog 2 Dictyostelium discoideum
Q9P8V3 7.2e-06 50 26 6 167 2 Cht Cyanide hydratase Leptosphaeria maculans
A2RA31 8.8e-06 50 27 6 164 1 An18g01740 Arylacetonitrilase Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
Q7Z8M6 2.95e-05 48 26 6 167 2 CyhAB Cyanide hydratase Alternaria brassicicola
Q17YA2 4.64e-05 48 27 5 140 3 amiE Aliphatic amidase Helicobacter acinonychis (strain Sheeba)
E3RV84 5.08e-05 48 27 6 167 1 chy Cyanide hydratase Pyrenophora teres f. teres (strain 0-1)
P40447 5.51e-05 47 30 8 189 5 NIT1 Putative nitrilase-like protein NIT1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
B6JN78 5.84e-05 47 27 8 186 3 amiF Formamidase Helicobacter pylori (strain P12)
B6HVR6 5.85e-05 47 25 6 164 1 Pc22g19330ma2m Nitrilase Penicillium rubens (strain ATCC 28089 / DSM 1075 / NRRL 1951 / Wisconsin 54-1255)
Q89PT3 7.17e-05 47 28 6 169 1 blr3397 Nitrilase blr3397 Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
O25836 7.78e-05 47 27 8 186 1 amiF Formamidase Helicobacter pylori (strain ATCC 700392 / 26695)
B2UV01 7.78e-05 47 27 8 186 3 amiF Formamidase Helicobacter pylori (strain Shi470)
B5Z8N3 7.78e-05 47 27 8 186 3 amiF Formamidase Helicobacter pylori (strain G27)
C7YS90 7.96e-05 47 23 5 167 1 NECHADRAFT_80653 Arylacetonitrilase Fusarium vanettenii (strain ATCC MYA-4622 / CBS 123669 / FGSC 9596 / NRRL 45880 / 77-13-4)
Q9ZJY8 8.91e-05 47 27 8 186 3 amiF Formamidase Helicobacter pylori (strain J99 / ATCC 700824)
Q1CS25 8.91e-05 47 26 7 186 3 amiF Formamidase Helicobacter pylori (strain HPAG1)
P9WEU6 8.96e-05 47 28 8 184 1 nit Arylacetonitrilase Trametes versicolor (strain FP-101664)
A2R6M7 8.98e-05 47 26 4 166 1 An16g00550 Arylacetonitrilase Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
A9QXE0 0.000103 47 23 13 320 1 None Cyanide hydratase Aspergillus niger
B2USC5 0.000103 47 27 5 140 3 amiE Aliphatic amidase Helicobacter pylori (strain Shi470)
Q9ZME1 0.000103 47 27 5 140 3 amiE Aliphatic amidase Helicobacter pylori (strain J99 / ATCC 700824)
P82605 0.000152 46 29 8 188 1 nit Nitrilase Bacillus sp. (strain OxB-1)
Q17WY3 0.000172 46 27 8 186 3 amiF Formamidase Helicobacter acinonychis (strain Sheeba)
G7X8S6 0.000172 46 26 6 163 1 nit2 Arylacetonitrilase Aspergillus kawachii (strain NBRC 4308)
Q1CUK9 0.000229 46 27 5 140 3 amiE Aliphatic amidase Helicobacter pylori (strain HPAG1)
B6JKM3 0.000229 46 27 5 140 3 amiE Aliphatic amidase Helicobacter pylori (strain P12)
O25067 0.000258 45 27 5 140 1 amiE Aliphatic amidase Helicobacter pylori (strain ATCC 700392 / 26695)
B5ZA60 0.000258 45 27 5 140 3 amiE Aliphatic amidase Helicobacter pylori (strain G27)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS15425
Feature type CDS
Gene -
Product nitrilase family protein
Location 3426782 - 3427753 (strand: 1)
Length 972 (nucleotides) / 323 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3048
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00795 Carbon-nitrogen hydrolase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0388 Energy production and conversion (C) C Omega-amidase YafV/Nit2, hydrolyzes alpha-ketoglutaramate

Protein Sequence

MNPLTTLRVASVQLQHKANDKDYNLAKIHQFIEMAASEKVNLLVFPEMCITGYWHVPKLPAQQVYALSEKLADSASLKSIKQKAQQYAMAIGVGLIERDNNNNLYNTWVVCMPDGSLQKHRKLHAFEHPVICSGDQYTVFDTPWGIKMGILICWDNNLVENARATALLGADILLAPHQTGGTHSRSPHSMKPIPMALWENRQQDPQALQAAFQGEHGKGWLMRWLPARAHDNGMFIIFSNGVGRDEEEVRTGNAMVIDPYGRIVKESCAIEDDMVVTDIDLTLLPESTGRRWLTGRRPELYQILTTRQGNEQDPISVRFGNKD

Flanking regions ( +/- flanking 50bp)

ATAATAAAGGTGAAAAGGTGATAAATAAGACAGTGTAGAGGTAACCGTTTATGAACCCATTAACGACATTACGTGTTGCAAGCGTACAACTACAACATAAGGCTAATGATAAAGATTATAATTTAGCCAAAATACATCAGTTTATTGAGATGGCTGCCAGTGAAAAAGTGAATCTTCTAGTATTTCCTGAAATGTGTATCACGGGATACTGGCATGTCCCTAAATTACCGGCGCAACAGGTTTATGCATTAAGTGAAAAACTGGCTGATAGCGCATCATTAAAATCCATTAAACAAAAAGCACAACAGTATGCAATGGCTATTGGTGTTGGATTAATTGAACGGGATAACAATAATAATTTGTATAATACTTGGGTTGTTTGTATGCCTGATGGTTCATTACAAAAACATCGTAAATTGCATGCATTTGAACATCCGGTTATTTGTAGCGGAGATCAATACACCGTATTTGATACCCCATGGGGGATTAAAATGGGTATTTTAATTTGCTGGGATAATAATTTAGTTGAGAACGCACGGGCGACGGCGTTATTAGGGGCAGATATTTTATTGGCTCCTCATCAAACTGGCGGAACCCACTCTCGTAGTCCACACAGCATGAAACCTATTCCAATGGCGTTGTGGGAAAATCGTCAGCAAGATCCACAAGCGTTACAAGCTGCTTTTCAAGGTGAACATGGCAAAGGATGGCTAATGCGCTGGTTACCTGCTAGAGCTCACGATAATGGTATGTTTATCATCTTCAGTAATGGGGTTGGGCGTGATGAAGAAGAGGTGAGAACGGGTAATGCGATGGTTATCGATCCTTATGGACGTATTGTAAAAGAAAGCTGTGCGATAGAAGACGATATGGTCGTCACGGATATTGATTTAACGCTTTTGCCTGAATCAACAGGGAGACGCTGGTTAACGGGCAGAAGACCAGAGCTATATCAGATCCTCACCACTCGACAAGGTAATGAACAAGATCCGATTTCCGTTCGTTTTGGTAACAAAGACTAATAGAGATAATTATAAAAAGAGCATAATTATTTATCAGGCAAAAGATTAAC