Homologs in group_1624

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10705 FBDBKF_10705 50.7 Morganella morganii S1 gntX DNA utilization protein GntX
EHELCC_15040 EHELCC_15040 50.7 Morganella morganii S2 gntX DNA utilization protein GntX
NLDBIP_14870 NLDBIP_14870 50.7 Morganella morganii S4 gntX DNA utilization protein GntX
LHKJJB_14475 LHKJJB_14475 50.7 Morganella morganii S3 gntX DNA utilization protein GntX
HKOGLL_13095 HKOGLL_13095 50.7 Morganella morganii S5 gntX DNA utilization protein GntX
F4V73_RS14420 F4V73_RS14420 46.7 Morganella psychrotolerans - phosphoribosyltransferase family protein

Distribution of the homologs in the orthogroup group_1624

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1624

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q83J92 1.26e-63 200 45 1 229 3 gntX DNA utilization protein YhgH Shigella flexneri
Q8X715 1.97e-63 200 45 1 229 3 gntX DNA utilization protein YhgH Escherichia coli O157:H7
P46846 2.1e-63 199 45 1 229 3 gntX DNA utilization protein YhgH Escherichia coli (strain K12)
Q8FCT3 2.4e-63 199 45 1 229 3 gntX DNA utilization protein YhgH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8ZLI8 8.56e-63 198 44 1 229 3 gntX DNA utilization protein YhgH Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z222 4.99e-62 196 44 1 229 3 gntX DNA utilization protein YhgH Salmonella typhi
P31773 3.56e-40 140 34 4 229 3 comF Competence protein F Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39147 7.13e-06 48 25 9 219 3 comFC ComF operon protein 3 Bacillus subtilis (strain 168)
Q8FQV2 4.56e-05 47 47 1 53 3 prs Ribose-phosphate pyrophosphokinase Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
Q7W3L2 5.53e-05 46 28 8 191 3 apt Adenine phosphoribosyltransferase Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
Q7WEY7 5.53e-05 46 28 8 191 3 apt Adenine phosphoribosyltransferase Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
Q8NRU9 0.000373 44 43 1 53 3 prs Ribose-phosphate pyrophosphokinase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14460
Feature type CDS
Gene -
Product DNA utilization protein GntX
Location 3207894 - 3208586 (strand: 1)
Length 693 (nucleotides) / 230 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1624
Orthogroup size 7
N. genomes 7

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1040 General function prediction only (R) R DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02242 competence protein ComFC - -

Protein Sequence

MLITIAGYCWLCRQPLRYGNHSICSSCIRHLPQQNNRCPGCLYPSTHSMILCGRCLRSPPRWKQMLTVTDYRPPLNKLLHLYKYHPRPQIALCLAKLFLLRWLAHRRENLVRKPEQIISVPLHRHRRWRRGFDQVEAIAKPLARWLNCPYHPNTLIRTRATLAQTHLNAKQRQQNLNNAFIVNRTVSVAGKDLALIDDVITTSATLNAIVPLLFRAGARSVEVWAICRTL

Flanking regions ( +/- flanking 50bp)

AATTTATTCATTGTTATGCTCTCTTCTCTTATTTTACAGGGATGTGCACTATGCTGATAACAATAGCAGGATATTGCTGGTTATGTCGTCAACCATTGCGGTATGGTAACCACAGCATTTGTTCAAGTTGTATTCGTCATCTGCCACAACAAAATAATCGTTGTCCGGGATGTTTGTATCCCTCTACCCACTCAATGATATTGTGTGGACGGTGTTTGCGATCACCACCTCGCTGGAAACAGATGTTGACAGTCACTGACTATCGCCCACCGCTTAATAAATTATTACACCTTTATAAATATCATCCTCGCCCTCAGATAGCATTATGTCTTGCGAAACTTTTTTTATTACGGTGGCTTGCTCATCGTCGCGAGAATTTAGTTCGCAAGCCAGAGCAAATTATTAGCGTACCGCTACATCGACATCGTCGTTGGCGTAGAGGCTTCGACCAAGTTGAGGCTATCGCTAAACCTTTGGCAAGATGGTTAAATTGTCCTTATCACCCTAATACCTTGATAAGAACTCGTGCTACACTGGCACAAACACATCTTAATGCCAAACAAAGGCAACAAAATTTAAATAATGCCTTTATCGTAAATCGCACAGTGTCAGTGGCAGGTAAGGATCTGGCACTGATTGATGATGTTATCACCACAAGCGCGACGCTCAATGCTATTGTACCTTTGCTATTTCGTGCTGGAGCACGCTCTGTTGAGGTATGGGCTATTTGCCGAACCTTGTAGTTAACCGTCAATTGGGCGTATGATAACCAACCAGAACAGTCAACTATTGA