Homologs in group_1666

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10705 FBDBKF_10705 100.0 Morganella morganii S1 gntX DNA utilization protein GntX
NLDBIP_14870 NLDBIP_14870 100.0 Morganella morganii S4 gntX DNA utilization protein GntX
LHKJJB_14475 LHKJJB_14475 100.0 Morganella morganii S3 gntX DNA utilization protein GntX
HKOGLL_13095 HKOGLL_13095 100.0 Morganella morganii S5 gntX DNA utilization protein GntX
F4V73_RS14420 F4V73_RS14420 81.9 Morganella psychrotolerans - phosphoribosyltransferase family protein
PMI_RS14460 PMI_RS14460 50.7 Proteus mirabilis HI4320 - DNA utilization protein GntX

Distribution of the homologs in the orthogroup group_1666

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1666

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8Z222 3.52e-72 222 51 0 227 3 gntX DNA utilization protein YhgH Salmonella typhi
Q8ZLI8 1.91e-71 220 51 0 227 3 gntX DNA utilization protein YhgH Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P46846 1.33e-68 213 50 0 227 3 gntX DNA utilization protein YhgH Escherichia coli (strain K12)
Q83J92 3.88e-68 211 49 0 227 3 gntX DNA utilization protein YhgH Shigella flexneri
Q8X715 5.1e-68 211 49 0 227 3 gntX DNA utilization protein YhgH Escherichia coli O157:H7
Q8FCT3 8.99e-68 211 49 0 227 3 gntX DNA utilization protein YhgH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P31773 3.5e-50 166 37 2 228 3 comF Competence protein F Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P39147 8.67e-08 54 27 11 230 3 comFC ComF operon protein 3 Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_15040
Feature type CDS
Gene gntX
Product DNA utilization protein GntX
Location 108305 - 108988 (strand: -1)
Length 684 (nucleotides) / 227 (amino acids)
In genomic island -

Contig

Accession ZDB_225
Length 129223 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1666
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00156 Phosphoribosyl transferase domain
PF18912 Double zinc ribbon domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1040 General function prediction only (R) R DNA utilization protein ComFC/GntX, contains phosphoribosyltransferase domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02242 competence protein ComFC - -

Protein Sequence

MVIIENYCLLCNQPLAIAAHGICGFCERGLPEMPPVCRRCGLPLVTPEPECGRCLQSPPPWQSLLAVTGYQPPLAALVHRLKYSGQTHIARALARLLLRRVLAAYRAGECPKPDLLLSVPLYRYRQWRRGFNQSDLITLPLAKWLRCPYDSSGLIRTRATLSQRMLSRTQRLTNLSSAFAVTRDVRGLHIALTDDVITTGATMTALSELLIRAGAAAVRVWCLCRTL

Flanking regions ( +/- flanking 50bp)

AAAAGCGTTGCCATCGTTATTGTTTCCTTATTTATCCGGAGGGAAGACGGATGGTTATTATTGAGAATTACTGCCTGCTGTGCAATCAGCCGCTGGCAATTGCCGCACACGGTATCTGCGGATTCTGCGAACGGGGACTGCCGGAGATGCCGCCGGTCTGCCGTCGCTGCGGCCTGCCGCTGGTGACACCGGAGCCGGAATGCGGCCGCTGTCTGCAATCCCCGCCGCCGTGGCAGAGCCTGCTGGCCGTAACCGGCTATCAGCCACCGCTGGCCGCCCTGGTTCACCGCCTCAAATACAGCGGGCAGACACACATTGCCCGTGCACTGGCACGGCTGCTGCTGCGCCGGGTGCTGGCAGCTTACCGCGCCGGGGAATGTCCGAAGCCGGATCTGCTGCTCAGTGTCCCGCTTTACCGCTACCGGCAATGGCGGCGCGGGTTTAATCAGAGTGATCTTATCACCCTTCCGCTGGCAAAATGGCTGCGCTGCCCTTATGACAGTTCCGGCCTTATCCGCACCCGTGCTACACTGAGCCAGCGGATGCTGTCCCGCACACAGCGCCTGACAAACCTGTCCTCTGCGTTTGCCGTCACCCGTGATGTCCGCGGACTGCATATTGCGCTGACCGATGATGTCATCACAACAGGGGCGACCATGACAGCGCTGTCTGAATTGCTCATTCGTGCGGGCGCGGCGGCAGTCCGGGTGTGGTGCCTTTGCCGCACCTTGTAGTGAACCCGCAAATGGGCGTATTATAACCAACCGGAACAGTCAACTATTTT