Homologs in group_3813

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS02145 F4V73_RS02145 69.8 Morganella psychrotolerans - helix-turn-helix domain-containing protein

Distribution of the homologs in the orthogroup group_3813

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3813

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9KMA5 0.000501 39 33 0 54 1 higA-2 Antitoxin HigA-2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14120
Feature type CDS
Gene -
Product helix-turn-helix domain-containing protein
Location 3135724 - 3136044 (strand: 1)
Length 321 (nucleotides) / 106 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3813
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF01381 Helix-turn-helix

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2944 Transcription (K) K DNA-binding transcriptional regulator YiaG, XRE-type HTH domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07726 putative transcriptional regulator - -

Protein Sequence

MTDKMKEMLKFAQEMEDAGVTDGSTTKRIAARIKAKELQAKYKHPTPMTGEDIKRIREQNNISQSSLALILNMTKESVSKWERNEIKPNGAALRLLHLIDKKILFI

Flanking regions ( +/- flanking 50bp)

AAATAAAATAGATAAAATGATTGCACTAGGCCTTTTAACAGAGGTTAAATATGACTGATAAAATGAAAGAAATGCTAAAATTTGCACAAGAAATGGAAGATGCAGGAGTCACTGATGGCAGTACAACTAAACGTATTGCCGCCAGAATAAAAGCGAAAGAATTACAAGCTAAGTATAAACATCCTACCCCTATGACAGGTGAAGATATAAAAAGGATCCGTGAGCAAAATAATATCTCTCAATCTTCCCTTGCTTTGATATTGAATATGACTAAAGAAAGCGTTTCTAAGTGGGAAAGAAACGAAATTAAGCCCAATGGTGCAGCACTACGACTTCTGCATTTAATAGATAAAAAAATATTATTCATCTAGTTTCCTCAAAAGAATAAAAACCGACATTGCGAAAGCAGTGCCGGTTTTTT