Homologs in group_3813
1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.
| Locus tag | Identity | Source | Gene | Product | |
|---|---|---|---|---|---|
| PMI_RS14120 | PMI_RS14120 | 69.8 | Proteus mirabilis HI4320 | - | helix-turn-helix domain-containing protein |
Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
| Swissprot accession | Eval | Score | ID (%) | N gaps | Alignment length | Annot score | Gene | Description | Organism |
|---|
| Source | Morganella psychrotolerans |
|---|---|
| Locus tag | F4V73_RS02145 |
| Feature type | CDS |
| Gene | - |
| Product | helix-turn-helix domain-containing protein |
| Location | 458174 - 458494 (strand: 1) |
| Length | 321 (nucleotides) / 106 (amino acids) |
| Accession | term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object |
|---|---|
| Length | 2012992 nucleotides |
| Topology | linear |
| Plasmid | False |
| Orthogroup | group_3813 | |
|---|---|---|
| Orthogroup size | 2 | |
| N. genomes | 2 |
| PF01381 | Helix-turn-helix |
|---|
| ID | Function(s) descr. | Function(s) cat. | Description |
|---|---|---|---|
| COG2944 | Transcription (K) | K | DNA-binding transcriptional regulator YiaG, XRE-type HTH domain |
| KO | Description | Pathways | Modules |
|---|---|---|---|
| K07726 | putative transcriptional regulator | - | - |
MTRKMNEIFEFFKEMKAAGVTDGESVRRIEARIKARELQEHYRKPAPMTGNDIRCIRAEHNISQASLALILNMTKESVSKWERGEIKPHGAALRLLHLIDKNELVI
AAAGAATAGCAGGCAAATTACTCAAGCCCGCTTTATTAGTGGAGGTTAAAATGACCCGTAAAATGAATGAGATTTTTGAATTTTTCAAAGAGATGAAAGCTGCGGGTGTGACTGACGGTGAATCAGTACGCCGTATCGAGGCACGGATTAAAGCCCGTGAACTACAGGAACACTATCGTAAGCCGGCACCTATGACGGGAAATGATATTCGTTGTATTCGTGCAGAGCATAATATTTCCCAGGCGTCTCTGGCGCTTATTCTCAATATGACGAAAGAGAGTGTATCTAAGTGGGAACGGGGTGAAATTAAACCACACGGTGCTGCACTCCGGCTCTTGCATCTGATCGACAAAAATGAGTTGGTTATTTAAGATGTAAATATTCCTTGGTAATTATTTTATTAAACAAACAATGTGTTTTT
