Homologs in group_313

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09295 FBDBKF_09295 45.0 Morganella morganii S1 flhB Flagellar biosynthesis protein FlhB
EHELCC_10115 EHELCC_10115 45.0 Morganella morganii S2 flhB Flagellar biosynthesis protein FlhB
NLDBIP_10460 NLDBIP_10460 45.0 Morganella morganii S4 flhB Flagellar biosynthesis protein FlhB
LHKJJB_10895 LHKJJB_10895 45.0 Morganella morganii S3 flhB Flagellar biosynthesis protein FlhB
HKOGLL_13955 HKOGLL_13955 45.0 Morganella morganii S5 flhB Flagellar biosynthesis protein FlhB
F4V73_RS08350 F4V73_RS08350 27.7 Morganella psychrotolerans - EscU/YscU/HrcU family type III secretion system export apparatus switch protein
F4V73_RS10670 F4V73_RS10670 42.8 Morganella psychrotolerans - EscU/YscU/HrcU family type III secretion system export apparatus switch protein

Distribution of the homologs in the orthogroup group_313

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_313

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q2T713 1.62e-82 258 40 2 350 3 bsaZ Secretion apparatus protein BsaZ Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)
Q62B05 3.01e-80 253 40 1 340 3 bsaZ Secretion apparatus protein BsaZ Burkholderia mallei (strain ATCC 23344)
A2S1P8 3.01e-80 253 40 1 340 3 bsaZ Secretion apparatus protein BsaZ Burkholderia mallei (strain NCTC 10229)
A3MCG6 3.01e-80 253 40 1 340 3 bsaZ Secretion apparatus protein BsaZ Burkholderia mallei (strain NCTC 10247)
A3NLD7 3.06e-80 253 40 1 340 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain 668)
I1WUC2 3.21e-80 253 40 1 340 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain 1026b)
Q63K32 3.24e-80 253 40 1 340 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain K96243)
A3P6Z9 3.81e-80 253 40 1 340 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain 1106a)
Q3JL20 3.94e-80 253 40 1 340 3 bsaZ Secretion apparatus protein BsaZ Burkholderia pseudomallei (strain 1710b)
P40702 3.38e-79 249 37 0 341 1 spaS Surface presentation of antigens protein SpaS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1M9 3.77e-78 246 41 0 339 3 spaS Surface presentation of antigens protein SpaS Shigella sonnei
P0A1M8 3.77e-78 246 41 0 339 1 spaS Surface presentation of antigens protein SpaS Shigella flexneri
P69987 2.76e-51 177 31 3 348 1 yscU Yop proteins translocation protein U Yersinia pseudotuberculosis serotype I (strain IP32953)
P69986 2.76e-51 177 31 3 348 1 yscU Yop proteins translocation protein U Yersinia pestis
P35652 1.23e-37 141 30 8 359 3 hrcU Hypersensitivity response secretion protein HrcU Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P96069 1.22e-31 125 28 5 325 3 ssaU Secretion system apparatus protein SsaU Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P35538 1.07e-29 120 28 7 331 3 flhB Flagellar biosynthetic protein FlhB Bacillus subtilis (strain 168)
P57334 6.19e-26 110 25 3 347 3 flhB Flagellar biosynthetic protein FlhB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P40727 3.94e-25 107 23 5 373 1 flhB Flagellar biosynthetic protein FlhB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9ZL73 7.04e-25 106 28 9 344 3 flhB Flagellar biosynthetic protein FlhB Helicobacter pylori (strain J99 / ATCC 700824)
P76299 2.02e-23 103 24 5 372 1 flhB Flagellar biosynthetic protein FlhB Escherichia coli (strain K12)
Q89AN6 3.09e-23 102 27 5 348 3 flhB Flagellar biosynthetic protein FlhB Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q56886 6.73e-23 101 25 5 359 3 flhB Flagellar biosynthetic protein FlhB Yersinia enterocolitica
P56416 3.21e-22 99 27 5 346 3 flhB Flagellar biosynthetic protein FlhB Helicobacter pylori (strain ATCC 700392 / 26695)
O54243 2.29e-20 94 23 3 326 3 flhB Flagellar biosynthetic protein FlhB Rhizobium meliloti (strain 1021)
Q8K9S1 3.46e-20 94 26 9 370 3 flhB Flagellar biosynthetic protein FlhB Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
O67813 3.39e-18 87 26 6 250 1 flhB Flagellar biosynthetic protein FlhB Aquifex aeolicus (strain VF5)
O83710 1.95e-17 85 26 11 332 3 flhB Flagellar biosynthetic protein FlhB Treponema pallidum (strain Nichols)
P55723 2.04e-16 82 25 7 283 3 NGR_a00580 Probable translocation protein y4yO Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q44760 3.06e-14 76 26 9 335 3 flhB Flagellar biosynthetic protein FlhB Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS13230
Feature type CDS
Gene -
Product EscU/YscU/HrcU family type III secretion system export apparatus switch protein
Location 2937788 - 2938849 (strand: -1)
Length 1062 (nucleotides) / 353 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_313
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01312 FlhB HrpN YscU SpaS Family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1377 Cell motility (N) N Flagellar biosynthesis protein FlhB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K22510 type III secretion system export apparatus switch protein - -

Protein Sequence

MAEKTEKPTQKKLDDSAKKGQSFKSKELVSGLVYFIGVIYLFNQVKLDEFNQFYQSLLLHPTGISLKSYVEVISKLFFDIVLPIIIVTFLSGAIPSLFSSHFKLATEAIKIDFNHINPISGFKKIFSIRTIKDFLKTILFIIIFLITCYVFMILHMGEVVILYRADLEGVIDKWCSLVVSFIFIFFILSIPILILNIIADFFLFIKDMMMEKHEVKQEHKNMEGNPEIKSVRRQLHQELLDEPMKRVIRDSSAVIVNPTHVAVGIYFDPDNGIMPIVSLSCTNAKALAVKAYAKKVGTPVIRYPELARKLHHKYHLFEVIIDQDLLDVMDVLIWLKRVEIEGLSREEMDYINN

Flanking regions ( +/- flanking 50bp)

TCATTTTTTTAACAGTAGATACTTTTATTCTATTTTTATGAGTATTTATCATGGCTGAGAAAACAGAAAAGCCAACACAGAAAAAGCTTGATGATTCAGCAAAAAAAGGACAATCGTTTAAAAGTAAGGAACTGGTTTCTGGTTTAGTCTATTTCATTGGTGTTATATATTTATTTAATCAAGTGAAGTTGGATGAATTTAATCAATTTTATCAATCACTTTTACTGCATCCAACAGGTATTTCTTTAAAGAGTTATGTTGAAGTTATATCAAAATTATTCTTTGATATTGTACTACCGATCATTATTGTGACTTTTTTATCTGGCGCAATCCCTTCTCTATTTAGCTCCCATTTTAAACTTGCCACTGAAGCAATTAAAATTGATTTTAATCATATTAACCCCATTTCTGGATTTAAAAAAATATTTAGCATAAGAACAATAAAAGATTTTTTAAAAACAATATTATTTATTATTATATTTTTAATAACTTGTTATGTTTTCATGATTTTACATATGGGGGAAGTCGTTATACTATATCGCGCTGATTTAGAGGGGGTGATTGATAAATGGTGCTCATTAGTTGTTAGTTTTATATTTATATTTTTTATTTTATCGATACCTATTCTTATTTTAAATATTATTGCTGATTTCTTTTTATTCATAAAAGATATGATGATGGAAAAACATGAAGTTAAGCAAGAACATAAAAATATGGAAGGAAATCCAGAAATAAAATCGGTACGTAGACAACTTCATCAAGAATTACTCGATGAGCCAATGAAACGTGTGATCCGCGACTCATCAGCTGTTATTGTCAATCCCACACATGTCGCGGTAGGTATCTACTTCGATCCTGATAATGGCATAATGCCAATAGTTTCATTGAGTTGTACTAATGCTAAAGCATTAGCAGTAAAGGCCTATGCCAAAAAAGTTGGTACACCCGTTATTCGTTATCCTGAATTAGCAAGGAAGCTACATCATAAATATCATTTATTTGAAGTGATAATAGATCAAGATTTATTAGATGTTATGGATGTTCTTATTTGGCTAAAAAGAGTAGAAATTGAAGGGTTATCTCGAGAAGAAATGGACTATATCAATAATTAATAAATTTAGTCGAAATATTTATAATTATGAATATAGACGTGTGTTTTATT